RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 EEF2KMTQ96G04 330 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 KATNAL1Q9BW62 490 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 IKZF4Q9H2S9 585 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 DMAC2Q9NW81 257 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 PDCD11Q14690 1871 aaKnown RBP13.17□□□□□ -0.3
EXOSC9-202ENST00000379663 MBLAC1A4D2B0 266 aaPredicted RBP13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 GNA14O95837 355 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 SMIM10L2AP0DMW4 78 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 SMIM10L2BP0DMW5 78 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 KLRC1P26715 233 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 CNGA1P29973 690 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 PSEN2P49810 448 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 COPB1P53618 953 aaKnown RBP13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 ADAM9Q13443 819 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 EFCAB12Q6NXP0 572 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 BEGAINQ9BUH8 593 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 DDX20Q9UHI6 824 aaKnown RBP13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
EXOSC9-202ENST00000379663 CETN3O15182 167 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 SLC16A3O15427 465 aaKnown RBP13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 ASAP2O43150 1006 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 PGK1P00558 417 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 PIGRP01833 764 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 INHAP05111 366 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 MYL3P08590 195 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 GRK4P32298 578 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 PBX1P40424 430 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 CLCN3P51790 818 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 IGBP1P78318 339 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 POU5F1BQ06416 359 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 MIIPQ5JXC2 388 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 ANKRD20A12PQ8NF67 263 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 ZBTB10Q96DT7 871 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 MKNK1Q9BUB5 465 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 SUGCTQ9HAC7 445 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 SPC25Q9HBM1 224 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
EXOSC9-202ENST00000379663 LRRIQ4A6NIV6 560 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 MSCO60682 206 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 TPM3P06753 285 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 DNM2P50570 870 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 HIC1Q14526 733 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 TRIM59Q8IWR1 403 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 BORCS6Q96GS4 357 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 MTG1Q9BT17 334 aaPredicted RBP13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
EXOSC9-202ENST00000379663 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 TISP43B9A030 160 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 CLIC2O15247 247 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 TEX33O43247 280 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 AKAP3O75969 853 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 EDN1P05305 212 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 ADSSP30520 456 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 CASP4P49662 377 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 EFNA5P52803 228 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 MAN2A1Q16706 1144 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 FRMD5Q7Z6J6 570 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 METTL13Q8N6R0 699 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 VPS16Q9H269 839 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 STYXL1Q9Y6J8 313 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 SMIM35A0A1B0GVV1 85 aa13.13□□□□□ -0.31
EXOSC9-202ENST00000379663 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms