RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CEP290O15078 2479 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 SNTNA6NMZ2 147 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 GFPT2O94808 682 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 USP6NLQ92738 828 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 CTNND1O60716 968 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 MB21D1Q8N884 522 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF555Q8NEP9 628 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 XPO4Q9C0E2 1151 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 AURKCQ9UQB9 309 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 LDHAP00338 332 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 CCT5P48643 541 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 INTS1Q8N201 2190 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 APOL1O14791 398 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 SERPIND1P05546 499 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 LIG3P49916 1009 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 EPM2AIP1Q7L775 607 aaPredicted RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF513Q8N8E2 541 aaPredicted RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 RMDN1Q96DB5 314 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ZFYVE1Q9HBF4 777 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ZWILCHQ9H900 591 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 COPEO14579 308 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 UHMK1Q8TAS1 419 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 VMP1Q96GC9 406 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 DISP3Q9P2K9 1392 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 C2orf40Q9H1Z8 148 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ATP11BQ9Y2G3 1177 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 TRAPPC3O43617 180 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 DARSP14868 501 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 HSD17B4P51659 736 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 PLTPP55058 493 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 DOK7Q18PE1 504 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 MFSD4BQ5TF39 518 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 TARSL2A2RTX5 802 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ERN1O75460 977 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 CCDC142Q17RM4 750 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 CNOT6LQ96LI5 555 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 ZFP69BQ9UJL9 534 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 PPP2R2CQ9Y2T4 447 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 UBE4BO95155 1302 aa11.91□□□□□ -0.5
PTCHD1-201ENST00000379361 TMEM60Q9H2L4 133 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 C19orf60Q96EN9 201 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 TESK2Q96S53 571 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 EVA1BQ9NVM1 165 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 DIS3Q9Y2L1 958 aaKnown RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 TADA3O75528 432 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 UVRAGQ9P2Y5 699 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 SERPINB13Q9UIV8 391 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 INAQ16352 499 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 MMP19Q99542 508 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 DESI2Q9BSY9 194 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 SESN1Q9Y6P5 492 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ASNSP08243 561 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 DAB1O75553 588 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 GDF11O95390 407 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ASMTLO95671 621 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 GRIK1P39086 918 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 AP2B1P63010 937 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 CEP95Q96GE4 821 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 EPB41L5Q9HCM4 733 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 GYG2O15488 501 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 SERPING1P05155 500 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 RXRBP28702 533 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 TTLL4Q14679 1199 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 APOBEC3FQ8IUX4 373 aaKnown RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 VPS50Q96JG6 964 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 KBTBD13C9JR72 458 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 AP3B1O00203 1094 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 VCLP18206 1134 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 CHRNA3P32297 505 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 MAPK6Q16659 721 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ANO5Q75V66 913 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 NUP85Q9BW27 656 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 PRRG1O14668 218 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 TLR2O60603 784 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 DDIASQ8IXT1 998 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 STAMQ92783 540 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 ZC3H7BQ9UGR2 993 aaKnown RBP11.9□□□□□ -0.5
PTCHD1-201ENST00000379361 NBNO60934 754 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms