RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 BSNDQ8WZ55 320 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 ARL8AQ96BM9 186 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 RMDN3Q96TC7 470 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 SH3GL2Q99962 352 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 THAP2Q9H0W7 228 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 CHORDC1Q9UHD1 332 aaPredicted RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 VWA5AO00534 786 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 CEP104O60308 925 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 RGS20O76081 388 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 GTF2BQ00403 316 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 GLE1Q53GS7 698 aaKnown RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 TTMPQ5BVD1 217 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 CCDC70Q6NSX1 233 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 HAUS6Q7Z4H7 955 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 MCF2L2Q86YR7 1114 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 RUBCNQ92622 972 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 HSPBP1Q9NZL4 362 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 HACL1Q9UJ83 578 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 RLFQ13129 1914 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 A0A0A6YYK5 440 aaPredicted RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 CTNND1O60716 968 aaKnown RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 ZBTB7AO95365 584 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 LYPLA2O95372 231 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 EPHB4P54760 987 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 PPATQ06203 517 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 ZSCAN26Q16670 478 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 EPC2Q52LR7 807 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 DDX42Q86XP3 938 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 SLC16A10Q8TF71 515 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 HES6Q96HZ4 224 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 POP1Q99575 1024 aaKnown RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 UBE2TQ9NPD8 197 aaPredicted RBP14.53□□□□□ -0.08
CCDC3-202ENST00000378839 PIM2Q9P1W9 311 aa14.53□□□□□ -0.08
CCDC3-202ENST00000378839 PFASO15067 1338 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.08
CCDC3-202ENST00000378839 STBD1O95210 358 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 VAMP7P51809 220 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 GUCY2FP51841 1108 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 BAATQ14032 418 aaPredicted RBP14.52□□□□□ -0.08
CCDC3-202ENST00000378839 KIF22Q14807 665 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 NSMFQ6X4W1 530 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 REPS2Q8NFH8 660 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 ACTRT1Q8TDG2 376 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 SEMA4DQ92854 862 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.08
CCDC3-202ENST00000378839 NOC2LQ9Y3T9 749 aaKnown RBP14.52□□□□□ -0.08
CCDC3-202ENST00000378839 LOXHD1Q8IVV2 1947 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 BHMG1C9JSJ3 638 aaPredicted RBP14.52□□□□□ -0.09
CCDC3-202ENST00000378839 CES2O00748 559 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 DDX3YO15523 660 aaKnown RBP14.52□□□□□ -0.09
CCDC3-202ENST00000378839 ZNF862O60290 1169 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 ANXA13P27216 316 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 SLC39A4Q6P5W5 647 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 EMBQ6PCB8 327 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 LRRC31Q6UY01 552 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 RNF207Q6ZRF8 634 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 DAAM2Q86T65 1068 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 CBWD2Q8IUF1 395 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 MICALL2Q8IY33 904 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 ZIM3Q96PE6 472 aa14.52□□□□□ -0.09
CCDC3-202ENST00000378839 LARSQ9P2J5 1176 aaKnown RBP14.52□□□□□ -0.09
CCDC3-202ENST00000378839 NCANO14594 1321 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 TESPA1A2RU30 521 aaPredicted RBP14.51□□□□□ -0.09
CCDC3-202ENST00000378839 SORBS3O60504 671 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ACTN2P35609 894 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 GMPSP49915 693 aaPredicted RBP14.51□□□□□ -0.09
CCDC3-202ENST00000378839 STXBP4Q6ZWJ1 553 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 PEX26Q7Z412 305 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 TMEM174Q8WUU8 243 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ACCSQ96QU6 501 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 PCDHB18PQ96TA0 734 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 TMEM117Q9H0C3 514 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 DDX47Q9H0S4 455 aaKnown RBP14.51□□□□□ -0.09
CCDC3-202ENST00000378839 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ACBD3Q9H3P7 528 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 INTUQ9ULD6 942 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 COL11A1P12107 1806 aaPredicted RBP14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ATP8B3O60423 1300 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ANKRD65E5RJM6 399 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 NCKAP1LP55160 1127 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 C4orf19Q8IY42 314 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 RASGEF1CQ8N431 466 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 SAAL1Q96ER3 474 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 SUCLA2Q9P2R7 463 aaPredicted RBP14.51□□□□□ -0.09
CCDC3-202ENST00000378839 ADGRA3Q8IWK6 1321 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 DOCK5Q9H7D0 1870 aa14.51□□□□□ -0.09
CCDC3-202ENST00000378839 TRIM66O15016 1216 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 TMEM253P0C7T8 217 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 MAPTP10636 758 aaKnown RBP14.5□□□□□ -0.09
CCDC3-202ENST00000378839 CHRNB2P17787 502 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 FAM102BQ5T8I3 360 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 ZNF746Q6NUN9 644 aaPredicted RBP14.5□□□□□ -0.09
CCDC3-202ENST00000378839 AADACL2Q6P093 401 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 CPNE8Q86YQ8 564 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 IFT20Q8IY31 132 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 TMEM161BQ8NDZ6 487 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 GOLGA5Q8TBA6 731 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 AFAP1L1Q8TED9 768 aa14.5□□□□□ -0.09
CCDC3-202ENST00000378839 TAF4BQ92750 862 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms