RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 PLIN2Q99541 437 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 FAM213AQ9BRX8 229 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 TUBGCP4Q9UGJ1 667 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 KITP10721 976 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CYP19A1P11511 503 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 XPAP23025 273 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 C15orf59Q2T9L4 293 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 DMAP1Q9NPF5 467 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 PCDHGB4Q9UN71 923 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 MESDQ14696 234 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 TTC29Q8NA56 475 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 MAGEB5Q9BZ81 275 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 RANBP17Q9H2T7 1088 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 TUBB1Q9H4B7 451 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 UBN1Q9NPG3 1134 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CYP26B1Q9NR63 512 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 HERC5Q9UII4 1024 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 SUGT1Q9Y2Z0 365 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 UBN2Q6ZU65 1347 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CCDC182A6NF36 153 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CASP4P49662 377 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 LRIG3Q6UXM1 1119 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 RHOT2Q8IXI1 618 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 PIK3C3Q8NEB9 887 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 POTEMA6NI47 508 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 DYNC1LI2O43237 492 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 FCGR1AP12314 374 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 GTF2H1P32780 548 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 MFAP3P55082 362 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 POLR2FP61218 127 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 VBP1P61758 197 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 GRSF1Q12849 480 aaKnown RBP eCLIP9.25□□□□□ -0.93
LIG3-202ENST00000378526 EPC2Q52LR7 807 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 POTEHQ6S545 545 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 POTEGQ6S5H5 508 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 C4orf50Q6ZRC1 276 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 ZNF554Q86TJ5 538 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CCDC33Q8N5R6 958 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 ACAP3Q96P50 834 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 ST7Q9NRC1 585 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 ZC3H7BQ9UGR2 993 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 FBXO9Q9UK97 447 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 ARHGEF33A8MVX0 844 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 CHP2O43745 196 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 S100A12P80511 92 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 TAF2Q6P1X5 1199 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 TTC13Q8NBP0 860 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 UBXN6Q9BZV1 441 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 VCPKMTQ9H867 229 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 RPRD1BQ9NQG5 326 aaKnown RBP9.25□□□□□ -0.93
LIG3-202ENST00000378526 EHD3Q9NZN3 535 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 HESX1Q9UBX0 185 aa9.25□□□□□ -0.93
LIG3-202ENST00000378526 ANO9A1A5B4 782 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 NDUFA10O95299 355 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 AGTP01019 485 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 NAA35Q5VZE5 725 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 RBBP8NLQ8NC74 664 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 CYFIP2Q96F07 1278 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 DHTKD1Q96HY7 919 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 CNDP1Q96KN2 507 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZNF285Q96NJ3 590 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 PAIP1Q9H074 479 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 PEX1O43933 1283 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZBED1O96006 694 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 BRAFP15056 766 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 CMA1P23946 247 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 LSP1P33241 339 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 GIMAP8Q8ND71 665 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZNF274Q96GC6 653 aaPredicted RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 GORASP1Q9BQQ3 440 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 OSBPL8Q9BZF1 889 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 FANCLQ9NW38 375 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 A0A0G2JPF8 293 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 MIF4GDA9UHW6 222 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 HNRNPCL3B7ZW38 293 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 PIK3CDO00329 1044 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 CCDC166P0CW27 439 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 HNRNPCL4P0DMR1 293 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 PTPREP23469 700 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 STK4Q13043 487 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 SVOPQ8N4V2 548 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 MINDY2Q8NBR6 621 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 HAVCR1Q96D42 359 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 ZC3H10Q96K80 434 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 PRMT1Q99873 361 aaKnown RBP9.24□□□□□ -0.93
LIG3-202ENST00000378526 THTPAQ9BU02 230 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 PRRG3Q9BZD7 231 aa9.24□□□□□ -0.93
LIG3-202ENST00000378526 DENND2AQ9ULE3 1009 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms