RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GCNT4Q9P109 453 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 MYH6P13533 1939 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GOLGA8RI6L899 631 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 TRPA1O75762 1119 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PHKG2P15735 406 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 TROAPQ12815 778 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 RASSF3Q86WH2 238 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 SLC25A41Q8N5S1 370 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 GSDMBQ8TAX9 411 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 SH3RF3Q8TEJ3 882 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 BORCS6Q96GS4 357 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 PDP2Q9P2J9 529 aa11.29□□□□□ -0.6
ARHGEF39-201ENST00000378387 HAUS5O94927 633 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 AFPP02771 609 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ACADSP16219 412 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 CASP7P55210 303 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SGO2Q562F6 1265 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ARHGAP18Q8N392 663 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SYT2Q8N9I0 419 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ETNK2Q9NVF9 386 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ANAPC5Q9UJX4 755 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 LRRC42Q9Y546 428 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 PITPNM2Q9BZ72 1349 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 PODXLO00592 558 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SERPINB6P35237 376 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 PGM1P36871 562 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SPARCL1Q14515 664 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 LBRQ14739 615 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 RILPQ96NA2 401 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 OCEL1Q9H607 264 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 STK10O94804 968 aaKnown RBP11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 TJP3O95049 919 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 CYP2D6P10635 497 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ALX1Q15699 326 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ARHGAP24Q8N264 748 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 ATXN10Q9UBB4 475 aa11.28□□□□□ -0.6
ARHGEF39-201ENST00000378387 GNA11P29992 359 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 GYG1P46976 350 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 KDSRQ06136 332 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 C1orf146Q5VVC0 180 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 CCDC125Q86Z20 511 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 KLF6Q99612 283 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.6
ARHGEF39-201ENST00000378387 A6NJR5 290 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 PGM3O95394 542 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 ATF2P15336 505 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 PPP2R5CQ13362 524 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 C10orf76Q5T2E6 689 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 NME8Q8N427 588 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 CCDC124Q96CT7 223 aaKnown RBP11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 FNBP1Q96RU3 617 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 NDE1Q9NXR1 346 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 SLAIN2Q9P270 581 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 SUCLA2Q9P2R7 463 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 DDAH1O94760 285 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 HSPA2P54652 639 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 PTENP60484 403 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 COASYQ13057 564 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 NT5DC3Q86UY8 548 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 CKAP2Q8WWK9 683 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 MAML1Q92585 1016 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 ADAM7Q9H2U9 754 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 TMEM260Q9NX78 707 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
ARHGEF39-201ENST00000378387 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
ARHGEF39-201ENST00000378387 E9PMD0 336 aa11.26□□□□□ -0.61
ARHGEF39-201ENST00000378387 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms