RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 RAB15P59190 212 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 KCNJ12Q14500 433 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 PIK3AP1Q6ZUJ8 805 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 SPATA5Q8NB90 893 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 RUNDC3BQ96NL0 473 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 TGS1Q96RS0 853 aaKnown RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 NOC4LQ9BVI4 516 aaKnown RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-202ENST00000378161 ATPIF1Q9UII2 106 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
NPHP4-202ENST00000378161 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 XPOTO43592 962 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 PLCB3Q01970 1234 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 NCAPHQ15003 741 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 SUZ12Q15022 739 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 NSMCE3Q96MG7 304 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 STK33Q9BYT3 514 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 MAN1B1Q9UKM7 699 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 STMN1P16949 149 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 HMOX2P30519 316 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 LSAMPQ13449 338 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 PRR16Q569H4 304 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 KRT79Q5XKE5 535 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 A0A0J9YVX5 310 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 ERVV-2B6SEH9 535 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 GIPC1O14908 333 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 ADCY6O43306 1168 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 CCDC22O60826 627 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 GUCY1B2O75343 617 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 LYNP07948 512 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 CDK7P50613 346 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 EHHADHQ08426 723 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 PPP2R5EQ16537 467 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 CFAP36Q96G28 342 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 MROH5Q6ZUA9 1318 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 SNTNA6NMZ2 147 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 KRT7P08729 469 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 TARSP26639 723 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 IFNA8P32881 189 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 WDR45BQ5MNZ6 344 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 FANCBQ8NB91 859 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 ATP8B4Q8TF62 1192 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 DDX28Q9NUL7 540 aaKnown RBP12.55□□□□□ -0.4
NPHP4-202ENST00000378161 MCM9Q9NXL9 1143 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 GTF3C4Q9UKN8 822 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
NPHP4-202ENST00000378161 CHEK2O96017 543 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 IGKV5-2P06315 115 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 PRKACBP22694 351 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 EEF1DP29692 281 aaKnown RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 COPB2P35606 906 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 TTC30BQ8N4P2 665 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 NT5C3AQ9H0P0 336 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 PIH1D3Q9NQM4 214 aaKnown RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 BCAP29Q9UHQ4 241 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 HAO1Q9UJM8 370 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 SPEF1Q9Y4P9 236 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 MED23Q9ULK4 1368 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 LINC00854A0A1B0GVQ3 168 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 CCDC162PA2VCL2 907 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 KRT6CP48668 564 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 LPIN1Q14693 890 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 C1orf146Q5VVC0 180 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 OSBP2Q969R2 916 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 EPS15L1Q9UBC2 864 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 MYO3AQ8NEV4 1616 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 TAF4O00268 1085 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 AGTP01019 485 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 CSE1LP55060 971 aaKnown RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 PDE4DQ08499 809 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 ASAP3Q8TDY4 903 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 STAMQ92783 540 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 CCDC127Q96BQ5 260 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
NPHP4-202ENST00000378161 DENND2AQ9ULE3 1009 aa12.54□□□□□ -0.4
NPHP4-202ENST00000378161 A0A1B0GTH6 734 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 H0YC42 278 aa12.53□□□□□ -0.4
NPHP4-202ENST00000378161 SARSP49591 514 aaKnown RBP12.53□□□□□ -0.4
NPHP4-202ENST00000378161 DNM2P50570 870 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms