RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DDX25Q9UHL0 483 aaKnown RBP21.49■■□□□ 1.03
CBWD3-204ENST00000377349 PLXNA3P51805 1871 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 MARCH6O60337 910 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 NEK4P51957 841 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 PIK3AP1Q6ZUJ8 805 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 ZNF410Q86VK4 478 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 KSR1Q8IVT5 923 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 CASP10Q92851 521 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 ZBP1Q9H171 429 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 SUCLA2Q9P2R7 463 aaPredicted RBP21.48■■□□□ 1.03
CBWD3-204ENST00000377349 VAV3Q9UKW4 847 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 STK36Q9NRP7 1315 aa21.48■■□□□ 1.03
CBWD3-204ENST00000377349 B4GALT3O60512 393 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 LARGE1O95461 756 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 SP100P23497 879 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-204ENST00000377349 CDC42EP1Q00587 391 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 TCF15Q12870 199 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 PLA2G4FQ68DD2 849 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 PHF20Q9BVI0 1012 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 ADAM7Q9H2U9 754 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 POMKQ9H5K3 350 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 IFT122Q9HBG6 1241 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 TBC1D13Q9NVG8 400 aa21.47■■□□□ 1.03
CBWD3-204ENST00000377349 WRAP73Q9P2S5 460 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-204ENST00000377349 RIF1Q5UIP0 2472 aaKnown RBP21.47■■□□□ 1.03
CBWD3-204ENST00000377349 ZFHX2Q9C0A1 2572 aaPredicted RBP21.47■■□□□ 1.03
CBWD3-204ENST00000377349 SFPQP23246 707 aaKnown RBP eCLIP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 ALDH7A1P49419 539 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 VCPP55072 806 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 LONRF3Q496Y0 759 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 RHPN2Q8IUC4 686 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 FAM177A1Q8N128 213 aaPredicted RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 ZNF579Q8NAF0 562 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 FEZF2Q8TBJ5 459 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 OXER1Q8TDS5 423 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 AUTS2Q8WXX7 1259 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 WASF1Q92558 559 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 VN1R3Q9BXE9 311 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 NRDE2Q9H7Z3 1164 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 FAM105AQ9NUU6 356 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 PIN4Q9Y237 131 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 MTCL1Q9Y4B5 1905 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 DOCK8Q8NF50 2099 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 DDX11L8A8MPP1 907 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 CCNT1O60563 726 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 ZNF623O75123 536 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 ZC3H11AO75152 810 aaKnown RBP eCLIP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 SEC24BO95487 1268 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 DNM2P50570 870 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 NPEPPSP55786 919 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 PSMC5P62195 406 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 PPP2R5CQ13362 524 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 ME3Q16798 604 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 TWF2Q6IBS0 349 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 SUGP1Q8IWZ8 645 aaKnown RBP21.46■■□□□ 1.03
CBWD3-204ENST00000377349 VPS52Q8N1B4 723 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 RSPH1Q8WYR4 309 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 TMEM169Q96HH4 297 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 IGSF21Q96ID5 467 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
CBWD3-204ENST00000377349 OFD1O75665 1012 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 GALTP07902 379 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 PTPRZ1P23471 2315 aaPredicted RBP21.45■■□□□ 1.02
CBWD3-204ENST00000377349 ITIH3Q06033 890 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 TPRNQ4KMQ1 711 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 NEK8Q86SG6 692 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 GTF3C6Q969F1 213 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 BRMS1Q9HCU9 246 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 CYP26B1Q9NR63 512 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 DNAJB4Q9UDY4 337 aa21.45■■□□□ 1.02
CBWD3-204ENST00000377349 C2CD4DB7Z1M9 353 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 CXCL14O95715 111 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 PDGFBP01127 241 aaPredicted RBP21.44■■□□□ 1.02
CBWD3-204ENST00000377349 WEE2P0C1S8 567 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 CTSAP10619 480 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 KRT2P35908 639 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 PTPN5P54829 565 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 NOMO2Q5JPE7 1267 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 KANK3Q6NY19 840 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 DDX53Q86TM3 631 aaKnown RBP21.44■■□□□ 1.02
CBWD3-204ENST00000377349 C12orf76Q8N812 135 aaPredicted RBP21.44■■□□□ 1.02
CBWD3-204ENST00000377349 SLC22A17Q8WUG5 538 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 HAS1Q92839 578 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 INO80BQ9C086 356 aaPredicted RBP21.44■■□□□ 1.02
CBWD3-204ENST00000377349 MINDY3Q9H8M7 445 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 FAM186AA6NE01 2351 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 DOCK6Q96HP0 2047 aa21.44■■□□□ 1.02
CBWD3-204ENST00000377349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.43■■□□□ 1.02
CBWD3-204ENST00000377349 SKIP12755 728 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 EPCAMP16422 314 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 QARSP47897 775 aaKnown RBP21.43■■□□□ 1.02
CBWD3-204ENST00000377349 SLC11A1P49279 550 aa21.43■■□□□ 1.02
CBWD3-204ENST00000377349 AFF1P51825 1210 aaKnown RBP21.43■■□□□ 1.02
CBWD3-204ENST00000377349 POLGP54098 1239 aaPredicted RBP21.43■■□□□ 1.02
CBWD3-204ENST00000377349 GLB1LQ6UWU2 654 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms