RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 PLS3P13797 630 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 CACNB2Q08289 660 aaPredicted RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 FAM110CQ1W6H9 321 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 GPD1LQ8N335 351 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 VTA1Q9NP79 307 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 NGRNQ9NPE2 291 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ZKSCAN5Q9Y2L8 839 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 EMSYQ7Z589 1322 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 FSD2A1L4K1 749 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 PABPN1LA6NDY0 278 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 SMIM23A6NLE4 172 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 B3GAT3O94766 335 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ADORA2BP29275 332 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 MRPS9P82933 396 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 NAALADL2Q58DX5 795 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 RINT1Q6NUQ1 792 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 ZNF365Q70YC5 407 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 GUF1Q8N442 669 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 MTMR14Q8NCE2 650 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 YME1L1Q96TA2 773 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 RANBP17Q9H2T7 1088 aaKnown RBP9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 DNAJC12Q9UKB3 198 aa9.14□□□□□ -0.95
CRNKL1-202ENST00000377340 GOLGA4Q13439 2230 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 SLC15A5A6NIM6 579 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 UBA1P22314 1058 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 RFC5P40937 340 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 BFSP2Q13515 415 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 RPS6KA1Q15418 735 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 NAA35Q5VZE5 725 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PPP4R3CPQ6ZMV5 832 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 KLHL7Q8IXQ5 586 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ANKS1AQ92625 1134 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 MTG1Q9BT17 334 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 BTBD7Q9P203 1132 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 AFG3L2Q9Y4W6 797 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ASAP2O43150 1006 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ACTN1P12814 892 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 CKAP4Q07065 602 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 RBL2Q08999 1139 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 TCP11X2Q5H9J9 407 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 LBX2Q6XYB7 198 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 HASPINQ8TF76 798 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 SENP7Q9BQF6 1050 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ANKEF1Q9NU02 776 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 HSPBP1Q9NZL4 362 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 SSX2IPQ9Y2D8 614 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PCDHB7Q9Y5E2 793 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PIK3R2O00459 728 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ATP9AO75110 1047 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ALDH7A1P49419 539 aaKnown RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 CDC42EP1Q00587 391 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 GRIK4Q16099 956 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 IQSEC1Q6DN90 963 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PGBD4Q96DM1 585 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 TMEM169Q96HH4 297 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 GCNAQ96QF7 691 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PDE11AQ9HCR9 933 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 EPN1Q9Y6I3 576 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ZC3H11AO75152 810 aaKnown RBP eCLIP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 RYBPQ8N488 228 aaPredicted RBP9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 GMLQ99445 158 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 TSGA10Q9BZW7 698 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 MIS12Q9H081 205 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 SEPT10Q9P0V9 454 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ODF2LQ9ULJ1 636 aa9.13□□□□□ -0.95
CRNKL1-202ENST00000377340 ATP2A1O14983 1001 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 FERP16591 822 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 DNAJB2P25686 324 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 FXR2P51116 673 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■■□□ 15
CRNKL1-202ENST00000377340 CALCOCO2Q13137 446 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 KRT39Q6A163 491 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 DAGLBQ8NCG7 672 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 CPB2Q96IY4 423 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 HINFPQ9BQA5 517 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 EML1O00423 815 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 MEIS2O14770 477 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 BIRC2Q13490 618 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 MFSD10Q14728 455 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 HADHQ16836 314 aaKnown RBP9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 MAP9Q49MG5 647 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 CASC4Q6P4E1 433 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 NFRKBQ6P4R8 1299 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 NOTUMQ6P988 496 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 C4orf50Q6ZRC1 276 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 TTC30AQ86WT1 665 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 REPS2Q8NFH8 660 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 ATP8B4Q8TF62 1192 aa9.12□□□□□ -0.95
CRNKL1-202ENST00000377340 APBA2Q99767 749 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms