RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CFAP73A6NFT4 308 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 BACH1O14867 736 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 CCNE1P24864 410 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
FXN-201ENST00000377270 KLC1Q07866 573 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
FXN-201ENST00000377270 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 ZNF365Q70YC5 407 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 MREGQ8N565 214 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 NOC3LQ8WTT2 800 aaKnown RBP16.71■□□□□ 0.27
FXN-201ENST00000377270 CDK5RAP3Q96JB5 506 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 LUC7LQ9NQ29 371 aaKnown RBP16.71■□□□□ 0.27
FXN-201ENST00000377270 CIDEBQ9UHD4 219 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 ZNF180Q9UJW8 692 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
FXN-201ENST00000377270 TPPPO94811 219 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 IFT20Q8IY31 132 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 BHMTQ93088 406 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 CARD9Q9H257 536 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 VCXQ9H320 206 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 POTEMA6NI47 508 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 VARSP26640 1264 aaKnown RBP16.7■□□□□ 0.26
FXN-201ENST00000377270 GSTM4Q03013 218 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 PPP1R18Q6NYC8 613 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 PODNQ7Z5L7 613 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 SESTD1Q86VW0 696 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 NACC2Q96BF6 587 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 RAB34Q9BZG1 259 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 BLOC1S4Q9NUP1 217 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 SLC12A4Q9UP95 1085 aa16.7■□□□□ 0.26
FXN-201ENST00000377270 A0A1W2PQC6 194 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ZBTB5O15062 677 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 APBA3O96018 575 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 IDO1P14902 403 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ALDH5A1P51649 535 aaPredicted RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 DMPKQ09013 629 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 IFI16Q16666 785 aaKnown RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 CNNM4Q6P4Q7 775 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ZNF554Q86TJ5 538 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 RNF25Q96BH1 459 aaPredicted RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 TCHPQ9BT92 498 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 NHEJ1Q9H9Q4 299 aaPredicted RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 CCT8L1PA6NM43 557 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 A8MUI8 341 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 TACC1O75410 805 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 FAM153BP0C7A2 387 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 TCP1P17987 556 aaKnown RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 PAK2Q13177 524 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 FAM153CQ494X1 144 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 DUS1LQ6P1R4 473 aaKnown RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 CCDC17Q96LX7 622 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
FXN-201ENST00000377270 FAM153AQ9UHL3 310 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
FXN-201ENST00000377270 HTR3EA5X5Y0 456 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 MYMKA6NI61 221 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 TRAPPC3O43617 180 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 DNM2P50570 870 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 KCNJ2P63252 427 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 ITGA7Q13683 1181 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 KRT79Q5XKE5 535 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 PEX5LQ8IYB4 626 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 DEPTORQ8TB45 409 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 SNX29Q8TEQ0 813 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 WDR60Q8WVS4 1066 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 LARP4BQ92615 738 aaKnown RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 ABTB1Q969K4 478 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 NUDT12Q9BQG2 462 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 GDF3Q9NR23 364 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 C5orf60A6NFR6 353 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 MARCH6O60337 910 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 GNA14O95837 355 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 GSTA1P08263 222 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 HPDP32754 393 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 PAFAH1B1P43034 410 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 CARSP49589 748 aaKnown RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 CLK2P49760 499 aaKnown RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 MCL1Q07820 350 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 QSER1Q2KHR3 1735 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
FXN-201ENST00000377270 SLC44A4Q53GD3 710 aa16.68■□□□□ 0.26
FXN-201ENST00000377270 ZNF362Q5T0B9 420 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms