RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 CCDC137Q6PK04 289 aaKnown RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 SCARA5Q6ZMJ2 495 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 ZNF564Q8TBZ8 553 aaPredicted RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 FBF1Q8TES7 1133 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 PI4K2AQ9BTU6 479 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 STK33Q9BYT3 514 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 PNMA2Q9UL42 364 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 ACTN3Q08043 901 aaPredicted RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 BFSP1Q12934 665 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 MTM1Q13496 603 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
GABBR1-203ENST00000377012 PSMD1Q99460 953 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 ALG6Q9Y672 507 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 PITPNM2Q9BZ72 1349 aa13.17□□□□□ -0.3
GABBR1-203ENST00000377012 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 GMNCA6NCL1 334 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 ASNSP08243 561 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
GABBR1-203ENST00000377012 RWDD2BP57060 319 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 PPP2R2AP63151 447 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 BRDTQ58F21 947 aaPredicted RBP13.16□□□□□ -0.3
GABBR1-203ENST00000377012 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 CCDC91Q7Z6B0 441 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 PPP1R14CQ8TAE6 165 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 CBWD1Q9BRT8 395 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 P4HBP07237 508 aaKnown RBP13.16□□□□□ -0.3
GABBR1-203ENST00000377012 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
GABBR1-203ENST00000377012 PMS2P54278 862 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 SETDB1Q15047 1291 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 EPHA7Q15375 998 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
GABBR1-203ENST00000377012 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 SLC20A1Q8WUM9 679 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 ACP6Q9NPH0 428 aa13.16□□□□□ -0.3
GABBR1-203ENST00000377012 DESP17661 470 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 MARK3P27448 753 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 TMED2Q15363 201 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 ZNF473Q8WTR7 871 aaKnown RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 ATP5DP30049 168 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 MEI1Q5TIA1 1274 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 FAM47EQ6ZV65 393 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 DBR1Q9UK59 544 aaKnown RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 USP20Q9Y2K6 914 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 CLDN3O15551 220 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 TLR2O60603 784 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 COMTP21964 271 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 RXRBP28702 533 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 IGBP1P78318 339 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 CCDC6Q16204 474 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 GPR162Q16538 588 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 TBC1D1Q86TI0 1168 aaPredicted RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 ATP6V0A1Q93050 837 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
GABBR1-203ENST00000377012 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 RAB20Q9NX57 234 aa13.15□□□□□ -0.3
GABBR1-203ENST00000377012 WDR91A4D1P6 747 aa13.15□□□□□ -0.31
GABBR1-203ENST00000377012 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.15□□□□□ -0.31
GABBR1-203ENST00000377012 AENQ8WTP8 325 aaKnown RBP13.15□□□□□ -0.31
GABBR1-203ENST00000377012 SLC35C1Q96A29 364 aa13.15□□□□□ -0.31
GABBR1-203ENST00000377012 TBX3O15119 743 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 DKC1O60832 514 aaKnown RBP eCLIP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 PRLRP16471 622 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 SOX10P56693 466 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 GNPTABQ3T906 1256 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 TMEM270Q6UE05 265 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 CTAGE3PQ8IX95 158 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 SLITRK6Q9H5Y7 841 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 NID2Q14112 1375 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 PI4K2BG5E9Z4 385 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
GABBR1-203ENST00000377012 ZNF131P52739 623 aa13.14□□□□□ -0.31
GABBR1-203ENST00000377012 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms