RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MSL3Q8N5Y2 521 aaKnown RBP21.98■■□□□ 1.11
VSX1-202ENST00000376709 TMEM174Q8WUU8 243 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 GABBR1Q9UBS5 961 aa21.98■■□□□ 1.11
VSX1-202ENST00000376709 ADM5C9JUS6 153 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 N4BP1O75113 896 aaKnown RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 RFX1P22670 979 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 VGLL4Q14135 290 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 ARHGAP44Q17R89 818 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 ATP6V0A1Q93050 837 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 ADARB2Q9NS39 739 aaKnown RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 NENFQ9UMX5 172 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 DAAM1Q9Y4D1 1078 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 SNCAIPQ9Y6H5 919 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 ATP8B3O60423 1300 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 SNRPFP62306 86 aaKnown RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 SP4Q02446 784 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 TAF4BQ92750 862 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 CEP170P1Q96L14 293 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 SENP7Q9BQF6 1050 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 ACBD3Q9H3P7 528 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 A1CFQ9NQ94 594 aaKnown RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 RBM12Q9NTZ6 932 aaKnown RBP21.97■■□□□ 1.11
VSX1-202ENST00000376709 CYP39A1Q9NYL5 469 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 EXOC7Q9UPT5 735 aa21.97■■□□□ 1.11
VSX1-202ENST00000376709 TULP1O00294 542 aaPredicted RBP21.96■■□□□ 1.11
VSX1-202ENST00000376709 ATP2A1O14983 1001 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 KCNA2P16389 499 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 PHLDB3Q6NSJ2 640 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 GLYCTKQ8IVS8 523 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 CDHR1Q96JP9 859 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 HINFPQ9BQA5 517 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 GPR88Q9GZN0 384 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 JPH1Q9HDC5 661 aaPredicted RBP21.96■■□□□ 1.11
VSX1-202ENST00000376709 DOCK5Q9H7D0 1870 aa21.96■■□□□ 1.11
VSX1-202ENST00000376709 A0A0U1RQG5 324 aaPredicted RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 LRRIQ3A6PVS8 624 aaPredicted RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 RGS20O76081 388 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 GCLMP48507 274 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 RPS6KA1Q15418 735 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 C8orf74Q6P047 294 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 CCNI2Q6ZMN8 369 aaPredicted RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 GSPT2Q8IYD1 628 aaKnown RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 HDAC7Q8WUI4 952 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 HOXC10Q9NYD6 342 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 INTUQ9ULD6 942 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 SPDYE16A6NNV3 312 aaPredicted RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 DKC1O60832 514 aaKnown RBP eCLIP21.95■■□□□ 1.1
VSX1-202ENST00000376709 LRRN2O75325 713 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 PSAPP07602 524 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 NPTX2P47972 431 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 PPP3CAQ08209 521 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 TMEM161BQ8NDZ6 487 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 ZSWIM2Q8NEG5 633 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 LMO3Q8TAP4 145 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 LNX1Q8TBB1 728 aaPredicted RBP21.95■■□□□ 1.1
VSX1-202ENST00000376709 RUBCNQ92622 972 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 KIFC3Q9BVG8 833 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 TBX20Q9UMR3 447 aa21.95■■□□□ 1.1
VSX1-202ENST00000376709 MAPK13O15264 365 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 P4HA2O15460 535 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 MYBL2P10244 700 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 FAM193AP78312 1265 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 GNPTABQ3T906 1256 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 SWSAP1Q6NVH7 229 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 LMBR1Q8WVP7 490 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 KIFAP3Q92845 792 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 GOLPH3Q9H4A6 298 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 KMT5AQ9NQR1 393 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 DMGDHQ9UI17 866 aaKnown RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 WDR90Q96KV7 1748 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 A0A0A6YYK5 440 aaPredicted RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 DENND3A2RUS2 1198 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 GOLGA8IPA6NC78 632 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 GOLGA8JA6NMD2 632 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 TMCO5BA8MYB1 307 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 ZNF862O60290 1169 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 MRPS25P82663 173 aaKnown RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 SLC7A5Q01650 507 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 HSP90B2PQ58FF3 399 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 LRRC57Q8N9N7 239 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 TPCN2Q8NHX9 752 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 SLC30A5Q8TAD4 765 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 CCDC102AQ96A19 550 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 DCPSQ96C86 337 aaKnown RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 GDAP1L1Q96MZ0 367 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 UBE2TQ9NPD8 197 aaPredicted RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 SEPT11Q9NVA2 429 aaKnown RBP21.94■■□□□ 1.1
VSX1-202ENST00000376709 SLC9A2Q9UBY0 812 aa21.94■■□□□ 1.1
VSX1-202ENST00000376709 KCNK3O14649 394 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 SORBS3O60504 671 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 GALCP54803 685 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 VIPAS39Q9H9C1 493 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 STIM2Q9P246 746 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 ARID2Q68CP9 1835 aa21.93■■□□□ 1.1
VSX1-202ENST00000376709 FOXN3O00409 490 aaPredicted RBP21.92■■□□□ 1.1
VSX1-202ENST00000376709 STAM2O75886 525 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 KIF4AO95239 1232 aa21.92■■□□□ 1.1
VSX1-202ENST00000376709 MXI1P50539 228 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms