RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 AKR1B1P15121 316 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 CHRNA3P32297 505 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TAOK1Q7L7X3 1001 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 ZNF131P52739 623 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 CCDC137Q6PK04 289 aaKnown RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 SYT2Q8N9I0 419 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 STMN4Q9H169 189 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 PTPN22Q9Y2R2 807 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 GPR75-ASB3A0A0A6YYF3 556 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 HGSO14964 777 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 SPATA31C1P0DKV0 1188 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TNFAIP3P21580 790 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 CCND1P24385 295 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TM4SF1P30408 202 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 NUGGCQ68CJ6 796 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 CROCCP2Q86T23 111 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 NBPF5PQ86XG9 351 aaPredicted RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TBC1D16Q8TBP0 767 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 DDX23Q9BUQ8 820 aaKnown RBP17.8■□□□□ 0.44
TRIM39-201ENST00000376656 SLC5A4Q9NY91 659 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 PCYOX1Q9UHG3 505 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 DNM3Q9UQ16 869 aa17.8■□□□□ 0.44
TRIM39-201ENST00000376656 TCRBV7S2A1N4TA0A589 114 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 TMEM120BA0PK00 339 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 SFI1A8K8P3 1242 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 TGFB1I1O43294 461 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 SUN1O94901 812 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 RARGP13631 454 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 POLD1P28340 1107 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 RHBDL3P58872 404 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 DPP8Q6V1X1 898 aaPredicted RBP17.79■□□□□ 0.44
TRIM39-201ENST00000376656 RUSC1Q9BVN2 902 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 CHORDC1Q9UHD1 332 aaPredicted RBP17.79■□□□□ 0.44
TRIM39-201ENST00000376656 PFASO15067 1338 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 MYO3BQ8WXR4 1341 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 SYNGAP1Q96PV0 1343 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 CTNNA2P26232 953 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 GCKP35557 465 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 GRIK3Q13003 919 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
TRIM39-201ENST00000376656 ARHGAP44Q17R89 818 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 FAM186BQ8IYM0 893 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 FITM2Q8N6M3 262 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 ARHGEF3Q9NR81 526 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 HOMER3Q9NSC5 361 aa17.79■□□□□ 0.44
TRIM39-201ENST00000376656 ANKRD62A6NC57 917 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 PODXLO00592 558 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 BMT2Q1RMZ1 405 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 VSTM1Q6UX27 236 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 KCTD1Q719H9 257 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ANKRD42Q8N9B4 389 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ARHGEF2Q92974 986 aaKnown RBP17.78■□□□□ 0.44
TRIM39-201ENST00000376656 PARP2Q9UGN5 583 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 THRAP3Q9Y2W1 955 aaKnown RBP17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ALAS1P13196 640 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 MSH2P43246 934 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 KCNJ1P48048 391 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 FMO5P49326 533 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 MAP2K1Q02750 393 aaPredicted RBP17.78■□□□□ 0.44
TRIM39-201ENST00000376656 SLMAPQ14BN4 828 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 CBWD6Q4V339 395 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 CBWD3Q5JTY5 395 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 CBWD5Q5RIA9 395 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ZBTB5O15062 677 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 CYP4A11Q02928 519 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ZKSCAN8Q15776 578 aaPredicted RBP17.78■□□□□ 0.44
TRIM39-201ENST00000376656 GDAP1Q8TB36 358 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 ART4Q93070 314 aa17.78■□□□□ 0.44
TRIM39-201ENST00000376656 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
TRIM39-201ENST00000376656 UBAP1LF5GYI3 381 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 LRRN2O75325 713 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 COG2Q14746 738 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 NFIXQ14938 502 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
TRIM39-201ENST00000376656 SPATA21Q7Z572 469 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 SLC20A1Q8WUM9 679 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 RMDN2Q96LZ7 410 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 CRAMP1Q96RY5 1269 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 ANO3Q9BYT9 981 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 BHMT2Q9H2M3 363 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 ADAM22Q9P0K1 906 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 CTTNBP2NLQ9P2B4 639 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 CTNNAL1Q9UBT7 734 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 ACSL3O95573 720 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 TRIM49P0CI25 452 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 TRIM49CP0CI26 452 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 CLUL1Q15846 466 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 PRR16Q569H4 304 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 KSR1Q8IVT5 923 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 CCDC105Q8IYK2 499 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 POP1Q99575 1024 aaKnown RBP17.77■□□□□ 0.44
TRIM39-201ENST00000376656 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.44
TRIM39-201ENST00000376656 ZMYM2Q9UBW7 1377 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 FRMPD4Q14CM0 1322 aa17.77■□□□□ 0.43
TRIM39-201ENST00000376656 TULP1O00294 542 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms