RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 HCSTQ9UBK5 93 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 KCNJ14Q9UNX9 436 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
HDAC6-204ENST00000376643 SLC37A4O43826 429 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
HDAC6-204ENST00000376643 FGFR4P22455 802 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 CA8P35219 290 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 KRT2P35908 639 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 BCAR1P56945 870 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 DRP2Q13474 957 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 KCNC3Q14003 757 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 NOMO2Q5JPE7 1267 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 PIK3AP1Q6ZUJ8 805 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 RPGRIP1Q96KN7 1286 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 RIPOR3Q96MK2 946 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
HDAC6-204ENST00000376643 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
HDAC6-204ENST00000376643 AGPAT5Q9NUQ2 364 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-204ENST00000376643 WDR81Q562E7 1941 aa16.49■□□□□ 0.23
HDAC6-204ENST00000376643 ERLIN2O94905 339 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 YWHABP31946 246 aaKnown RBP16.48■□□□□ 0.23
HDAC6-204ENST00000376643 MTHFRP42898 656 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 ZXDAP98168 799 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 TRIM29Q14134 588 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 TFDP1Q14186 410 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 MXD4Q14582 209 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-204ENST00000376643 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 TRIM67Q6ZTA4 783 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 DDX53Q86TM3 631 aaKnown RBP16.48■□□□□ 0.23
HDAC6-204ENST00000376643 HACE1Q8IYU2 909 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 CCDC51Q96ER9 411 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 FAM193BQ96PV7 902 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-204ENST00000376643 LXNQ9BS40 222 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 IRAK3Q9Y616 596 aa16.48■□□□□ 0.23
HDAC6-204ENST00000376643 TMEM221A6NGB7 291 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 C2orf71A6NGG8 1288 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 HIDE1A8MVS5 230 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 M0R296 226 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 EML1O00423 815 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 AXLP30530 894 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 SIGLEC14Q08ET2 396 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 PLA2G4FQ68DD2 849 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 LLGL2Q6P1M3 1020 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 HFE2Q6ZVN8 426 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 ZBTB33Q86T24 672 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 VPS52Q8N1B4 723 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 VN1R2Q8NFZ6 395 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 MTRQ99707 1265 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
HDAC6-204ENST00000376643 TMEM175Q9BSA9 504 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 S1PR5Q9H228 398 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-204ENST00000376643 SSX2IPQ9Y2D8 614 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 HCFC2Q9Y5Z7 792 aa16.47■□□□□ 0.23
HDAC6-204ENST00000376643 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-204ENST00000376643 TMEM150BA6NC51 233 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 CSDE1O75534 798 aaKnown RBP16.46■□□□□ 0.23
HDAC6-204ENST00000376643 CXCL14O95715 111 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 CTSAP10619 480 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 PBX3P40426 434 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 EMC2Q15006 297 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 XKR9Q5GH70 373 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 NCAPH2Q6IBW4 605 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 SYCE2Q6PIF2 218 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 PBXIP1Q96AQ6 731 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 IGSF21Q96ID5 467 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 SH2D3AQ9BRG2 576 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 EMILIN2Q9BXX0 1053 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 ZBP1Q9H171 429 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 IRF2BPLQ9H1B7 796 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 RSAD1Q9HA92 442 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 DPP7Q9UHL4 492 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 INPP5FQ9Y2H2 1132 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 MUC6Q6W4X9 2439 aa16.46■□□□□ 0.23
HDAC6-204ENST00000376643 CLASP2O75122 1294 aaKnown RBP16.45■□□□□ 0.22
HDAC6-204ENST00000376643 NR1I2O75469 434 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 OFD1O75665 1012 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 NPEPPSP55786 919 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 POU5F1BQ06416 359 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 LAMTOR4Q0VGL1 99 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 RNF149Q8NC42 400 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
HDAC6-204ENST00000376643 PCDHA12Q9UN75 941 aa16.45■□□□□ 0.22
HDAC6-204ENST00000376643 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 DGAT1O75907 488 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 LYPLA2O95372 231 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 ALDH2P05091 517 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms