RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PLEKHH3Q7Z736 793 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 ZSWIM2Q8NEG5 633 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 ASAP3Q8TDY4 903 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 CCDC42Q96M95 316 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.3■□□□□ 0.68
CTTN-203ENST00000376561 PPME1Q9Y570 386 aa19.3■□□□□ 0.68
CTTN-203ENST00000376561 MANSC4A6NHS7 340 aaPredicted RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 EIF3CLB5ME19 914 aaKnown RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 MAFO75444 373 aaPredicted RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 UCHL3P15374 230 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 NAMPTP43490 491 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 GNG11P61952 73 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 KRT83P78385 493 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 CBWD6Q4V339 395 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 ARHGAP29Q52LW3 1261 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 CBWD3Q5JTY5 395 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 CBWD5Q5RIA9 395 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 SAPCD2Q86UD0 394 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 ATP8B4Q8TF62 1192 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 KCNN1Q92952 543 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 EIF3CQ99613 913 aaKnown RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 KATNBL1Q9H079 304 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 RBM47A0AV96 593 aaKnown RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 FANCGO15287 622 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 SLC26A2P50443 739 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 ARHGAP1Q07960 439 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 BRDTQ58F21 947 aaPredicted RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 SFMBT2Q5VUG0 894 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 MAML3Q96JK9 1138 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 IRX2Q9BZI1 471 aaPredicted RBP19.29■□□□□ 0.68
CTTN-203ENST00000376561 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 CPA4Q9UI42 421 aa19.29■□□□□ 0.68
CTTN-203ENST00000376561 ADGRA2Q96PE1 1338 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 HNRNPDLO14979 420 aaKnown RBP19.28■□□□□ 0.68
CTTN-203ENST00000376561 SNAI1O95863 264 aaPredicted RBP19.28■□□□□ 0.68
CTTN-203ENST00000376561 ARHGAP25P42331 645 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 VAMP7P51809 220 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 PLCB4Q15147 1175 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 GJC2Q5T442 439 aaPredicted RBP19.28■□□□□ 0.68
CTTN-203ENST00000376561 RGMBQ6NW40 437 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 SMARCAD1Q9H4L7 1026 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 FBXL5Q9UKA1 691 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 TLR2O60603 784 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
CTTN-203ENST00000376561 ABL1P00519 1130 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 DLG4P78352 724 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 LAMC2Q13753 1193 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 HGSNATQ68CP4 663 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 GPIHBP1Q8IV16 184 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 WDR24Q96S15 920 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 ZCCHC17Q9NP64 241 aaKnown RBP19.28■□□□□ 0.68
CTTN-203ENST00000376561 FHOD1Q9Y613 1164 aa19.28■□□□□ 0.68
CTTN-203ENST00000376561 GOLGA8IPA6NC78 632 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 GOLGA8JA6NMD2 632 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 ZBTB42B2RXF5 422 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 GH1P01241 217 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 SCP2P22307 547 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 EIF4A3P38919 411 aaKnown RBP19.27■□□□□ 0.68
CTTN-203ENST00000376561 RAPGEF1Q13905 1077 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 DEPTORQ8TB45 409 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 AIPL1Q9NZN9 384 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 ZNF236Q9UL36 1845 aa19.27■□□□□ 0.68
CTTN-203ENST00000376561 SSU72P8A0A1W2PR75 194 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 SLC15A5A6NIM6 579 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 KIF5CO60282 957 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 ADRB2P07550 413 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 GTF2F1P35269 517 aaKnown RBP eCLIP19.27■□□□□ 0.671e-7■■■■■ 37.5
CTTN-203ENST00000376561 ADCYAP1R1P41586 468 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 MYL7Q01449 175 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 DRP2Q13474 957 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 SNRNP35Q16560 246 aaKnown RBP19.27■□□□□ 0.67
CTTN-203ENST00000376561 SLC9C1Q4G0N8 1177 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 CBWD2Q8IUF1 395 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 SAAL1Q96ER3 474 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 BICD1Q96G01 975 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 DEF6Q9H4E7 631 aa19.27■□□□□ 0.67
CTTN-203ENST00000376561 SIP14410 1827 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 ZNF263O14978 683 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 SERPING1P05155 500 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 KIF11P52732 1056 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 STRN3Q13033 797 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
CTTN-203ENST00000376561 TAF1CQ15572 869 aaPredicted RBP19.26■□□□□ 0.67
CTTN-203ENST00000376561 NPLOC4Q8TAT6 608 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 PLEKHO2Q8TD55 490 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 FBXL18Q96ME1 805 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 TINF2Q9BSI4 451 aa19.26■□□□□ 0.67
CTTN-203ENST00000376561 GARTP22102 1010 aa19.25■□□□□ 0.67
CTTN-203ENST00000376561 MCCD1P59942 119 aaPredicted RBP19.25■□□□□ 0.67
CTTN-203ENST00000376561 CYP27A1Q02318 531 aa19.25■□□□□ 0.67
CTTN-203ENST00000376561 CAPSQ13938 189 aa19.25■□□□□ 0.67
CTTN-203ENST00000376561 ASTE1Q2TB18 679 aaPredicted RBP19.25■□□□□ 0.67
CTTN-203ENST00000376561 TDRD12Q587J7 1177 aaKnown RBP19.25■□□□□ 0.67
CTTN-203ENST00000376561 C1orf220Q5T0J3 134 aa19.25■□□□□ 0.67
CTTN-203ENST00000376561 ZNF662Q6ZS27 426 aa19.25■□□□□ 0.67
CTTN-203ENST00000376561 EXOC8Q8IYI6 725 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms