RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SMPD1P17405 629 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 KRT9P35527 623 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 CRHR2Q13324 411 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 ZNF662Q6ZS27 426 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
PDPN-202ENST00000376057 C16orf70Q9BSU1 422 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 PLAGL2Q9UPG8 496 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 THSD7BQ9C0I4 1608 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 A6NJR5 290 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 GTF2H1P32780 548 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 SLFN12LQ6IEE8 588 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 TAS1R3Q7RTX0 852 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 TMC2Q8TDI7 906 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
PDPN-202ENST00000376057 ADGRA3Q8IWK6 1321 aa12.16□□□□□ -0.46
PDPN-202ENST00000376057 CCDC169A6NNP5 214 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
PDPN-202ENST00000376057 CLIC2O15247 247 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 ADCY3O60266 1144 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
PDPN-202ENST00000376057 RFX1P22670 979 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 CNGA1P29973 690 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 CASP4P49662 377 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 MAEAQ7L5Y9 396 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 COPS5Q92905 334 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 VTI1AQ96AJ9 217 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 MFSD14AQ96MC6 490 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 HSPBP1Q9NZL4 362 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 NOL4O94818 638 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 MMP3P08254 477 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 BFSP1Q12934 665 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 DGKDQ16760 1214 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
PDPN-202ENST00000376057 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
PDPN-202ENST00000376057 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 NEK11Q8NG66 645 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 BAP1Q92560 729 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 EEF2KMTQ96G04 330 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
PDPN-202ENST00000376057 ABT1Q9ULW3 272 aaKnown RBP12.15□□□□□ -0.46
PDPN-202ENST00000376057 ADSSP30520 456 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 CLDN10P78369 228 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 TNFAIP2Q03169 654 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 GBP6Q6ZN66 633 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 KSR1Q8IVT5 923 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 SH2D3AQ9BRG2 576 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 GANQ9H2C0 597 aa12.15□□□□□ -0.47
PDPN-202ENST00000376057 EXOC3O60645 756 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 C22orf31O95567 290 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 FCGRTP55899 365 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 POU5F1Q01860 360 aaKnown RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 STRN3Q13033 797 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 TFDP1Q14186 410 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 SLC39A4Q6P5W5 647 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 WDR59Q6PJI9 974 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 USP37Q86T82 979 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 ZNHIT6Q9NWK9 470 aaKnown RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 SORBS3O60504 671 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 LCA5LO95447 670 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 LDHAP00338 332 aaKnown RBP12.14□□□□□ -0.47
PDPN-202ENST00000376057 KRT13P13646 458 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 ANXA13P27216 316 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 CDC42EP1Q00587 391 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 CAPSQ13938 189 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 FAM187BQ17R55 369 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 DEPTORQ8TB45 409 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 AFG1LQ8WV93 481 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 FLRT1Q9NZU1 646 aa12.14□□□□□ -0.47
PDPN-202ENST00000376057 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
PDPN-202ENST00000376057 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 KPNA6O60684 536 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 PON1P27169 355 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 FMO5P49326 533 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 TERF1P54274 439 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 GRM1Q13255 1194 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
PDPN-202ENST00000376057 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 PDXDC1Q6P996 788 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 REXO1L1PQ8IX06 675 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
PDPN-202ENST00000376057 TMEM143Q96AN5 459 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 AGPAT5Q9NUQ2 364 aa12.13□□□□□ -0.47
PDPN-202ENST00000376057 K7ERI5 159 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms