RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ZBP1Q9H171 429 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 IRF2BPLQ9H1B7 796 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 CYP26B1Q9NR63 512 aa26.01■■□□□ 1.75
C9orf47-202ENST00000375850 CCDC194A0A1B0GVG4 234 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 TBX3O15119 743 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 GAS2O43903 313 aaKnown RBP26■■□□□ 1.75
C9orf47-202ENST00000375850 ZC3H11AO75152 810 aaKnown RBP eCLIP26■■□□□ 1.75
C9orf47-202ENST00000375850 NUBP1P53384 320 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 UBALD2Q8IYN6 164 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 ASIC4Q96FT7 647 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 KCNMB3Q9NPA1 279 aa26■■□□□ 1.75
C9orf47-202ENST00000375850 TMEM150BA6NC51 233 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 P4HBP07237 508 aaKnown RBP25.99■■□□□ 1.75
C9orf47-202ENST00000375850 CTSAP10619 480 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 RFC5P40937 340 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 RNASELQ05823 741 aaKnown RBP25.99■■□□□ 1.75
C9orf47-202ENST00000375850 INF2Q27J81 1249 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 LETM2Q2VYF4 491 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 SRGAP1Q7Z6B7 1085 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 NEK8Q86SG6 692 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 PPFIBP1Q86W92 1011 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 IGSF21Q96ID5 467 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 NLRP4Q96MN2 994 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 AGPAT5Q9NUQ2 364 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 TBC1D13Q9NVG8 400 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 COL4A3BPQ9Y5P4 624 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 TRIOO75962 3097 aa25.99■■□□□ 1.75
C9orf47-202ENST00000375850 WDR81Q562E7 1941 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.98■■□□□ 1.75
C9orf47-202ENST00000375850 NT5C1B-RDH14C9J2C7 533 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 CA8P35219 290 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 PRSS33Q8NF86 280 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 URGCPQ8TCY9 931 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 APOL5Q9BWW9 433 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 SLKQ9H2G2 1235 aaPredicted RBP25.98■■□□□ 1.75
C9orf47-202ENST00000375850 KANSL3Q9P2N6 904 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 VAV3Q9UKW4 847 aa25.98■■□□□ 1.75
C9orf47-202ENST00000375850 STK36Q9NRP7 1315 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 CNTNAP2Q9UHC6 1331 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 OFD1O75665 1012 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 GALTP07902 379 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 MTMR3Q13615 1198 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 PCBP1Q15365 356 aaKnown RBP eCLIP25.97■■□□□ 1.75
C9orf47-202ENST00000375850 OTUD6AQ7L8S5 288 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 TCP11Q8WWU5 503 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 PSPC1Q8WXF1 523 aaKnown RBP25.97■■□□□ 1.75
C9orf47-202ENST00000375850 SH2D3AQ9BRG2 576 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 PHF20Q9BVI0 1012 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 DHX33Q9H6R0 707 aaKnown RBP25.97■■□□□ 1.75
C9orf47-202ENST00000375850 NRDE2Q9H7Z3 1164 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 IFT122Q9HBG6 1241 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 PDRG1Q9NUG6 133 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 SORCS3Q9UPU3 1222 aa25.97■■□□□ 1.75
C9orf47-202ENST00000375850 ASAP2O43150 1006 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 SLC37A4O43826 429 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 ATAT1Q5SQI0 421 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 KIAA1841Q6NSI8 718 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 C4orf19Q8IY42 314 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 PLCD3Q8N3E9 789 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 LPPQ93052 612 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 CEP170P1Q96L14 293 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 POMKQ9H5K3 350 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 TSHZ2Q9NRE2 1034 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 USTQ9Y2C2 406 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 PCDHB2Q9Y5E7 798 aa25.96■■□□□ 1.75
C9orf47-202ENST00000375850 EML1O00423 815 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 STK3Q13188 491 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 EPHA7Q15375 998 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 IER5LQ5T953 404 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 PLA2G4FQ68DD2 849 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 MRPL10Q7Z7H8 261 aaKnown RBP25.95■■□□□ 1.74
C9orf47-202ENST00000375850 CNNM3Q8NE01 707 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 AIFM3Q96NN9 605 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 TMEM175Q9BSA9 504 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 UBN1Q9NPG3 1134 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 INPP5FQ9Y2H2 1132 aa25.95■■□□□ 1.74
C9orf47-202ENST00000375850 MARCH6O60337 910 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 AVPR2P30518 371 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 TMEM173Q86WV6 379 aaPredicted RBP25.94■■□□□ 1.74
C9orf47-202ENST00000375850 KSR1Q8IVT5 923 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 SLFN12Q8IYM2 578 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 ZDHHC14Q8IZN3 488 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 KREMEN2Q8NCW0 462 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 EMILIN2Q9BXX0 1053 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 KCNJ14Q9UNX9 436 aa25.94■■□□□ 1.74
C9orf47-202ENST00000375850 C2CD4DB7Z1M9 353 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 CCNT1O60563 726 aaKnown RBP25.93■■□□□ 1.74
C9orf47-202ENST00000375850 NPEPPSP55786 919 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 TDRD5Q8NAT2 981 aaKnown RBP25.93■■□□□ 1.74
C9orf47-202ENST00000375850 SLC22A17Q8WUG5 538 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 PRPF31Q8WWY3 499 aaKnown RBP25.93■■□□□ 1.74
C9orf47-202ENST00000375850 WASF1Q92558 559 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 ZSWIM4Q9H7M6 989 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 RSAD1Q9HA92 442 aa25.93■■□□□ 1.74
C9orf47-202ENST00000375850 BAG4O95429 457 aaKnown RBP25.92■■□□□ 1.74
C9orf47-202ENST00000375850 ALDH2P05091 517 aa25.92■■□□□ 1.74
C9orf47-202ENST00000375850 YWHABP31946 246 aaKnown RBP25.92■■□□□ 1.74
C9orf47-202ENST00000375850 SLC11A1P49279 550 aa25.92■■□□□ 1.74
C9orf47-202ENST00000375850 RARS2Q5T160 578 aaKnown RBP25.92■■□□□ 1.74
C9orf47-202ENST00000375850 CABP7Q86V35 215 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms