RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TSPAN1O60635 241 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 HIP1RO75146 1068 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 PDIA4P13667 645 aaKnown RBP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 DDIT3P35638 169 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 TFDP1Q14186 410 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 BECN1Q14457 450 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 ARSHQ5FYA8 562 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 UBXN11Q5T124 520 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 CDCA2Q69YH5 1023 aaPredicted RBP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 ZNF598Q86UK7 904 aaKnown RBP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 KRI1Q8N9T8 703 aaKnown RBP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 ARNTL2Q8WYA1 636 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 INO80BQ9C086 356 aaPredicted RBP17.7■□□□□ 0.42
C11orf88-202ENST00000375618 NT5C3AQ9H0P0 336 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 USP20Q9Y2K6 914 aa17.7■□□□□ 0.42
C11orf88-202ENST00000375618 COL4A4P53420 1690 aaPredicted RBP17.69■□□□□ 0.42
C11orf88-202ENST00000375618 MEIS3P2A8K0S8 358 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 SFI1A8K8P3 1242 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 INO80B-WBP1J3KQ70 363 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 SPTLC2O15270 562 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 SLC26A4O43511 780 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 YEATS4O95619 227 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
C11orf88-202ENST00000375618 ERVK-21P61565 698 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
C11orf88-202ENST00000375618 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 MCM6Q14566 821 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 PAN2Q504Q3 1202 aaKnown RBP17.69■□□□□ 0.42
C11orf88-202ENST00000375618 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 NFKBIZQ9BYH8 718 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 CHST12Q9NRB3 414 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 TMEM161AQ9NX61 479 aa17.69■□□□□ 0.42
C11orf88-202ENST00000375618 A0A0U1RQF3 1178 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 LPXNO60711 386 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 STAG3L1P0CL83 205 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 NAMPTP43490 491 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 LONRF3Q496Y0 759 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 CLLU1OSQ5K130 101 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 AXDND1Q5T1B0 1012 aaPredicted RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 SHC4Q6S5L8 630 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 RAD54LQ92698 747 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 CALML4Q96GE6 196 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 ELAC1Q9H777 363 aaKnown RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 LRFN2Q9ULH4 789 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 PCDHB7Q9Y5E2 793 aa17.68■□□□□ 0.42
C11orf88-202ENST00000375618 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
C11orf88-202ENST00000375618 PPP6R2O75170 966 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
C11orf88-202ENST00000375618 TWF2Q6IBS0 349 aaKnown RBP17.67■□□□□ 0.42
C11orf88-202ENST00000375618 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 CDR2LQ86X02 465 aaPredicted RBP17.67■□□□□ 0.42
C11orf88-202ENST00000375618 KCTD17Q8N5Z5 321 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 RNF169Q8NCN4 708 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 KIFAP3Q92845 792 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 LPPQ93052 612 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 TRAIPQ9BWF2 469 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 EIF2AQ9BY44 585 aaKnown RBP17.67■□□□□ 0.42
C11orf88-202ENST00000375618 FZD8Q9H461 694 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 STXBP5LQ9Y2K9 1186 aa17.67■□□□□ 0.42
C11orf88-202ENST00000375618 FNDC1Q4ZHG4 1894 aaPredicted RBP17.67■□□□□ 0.42
C11orf88-202ENST00000375618 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 NPTX2P47972 431 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 PEX3P56589 373 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 BTG3Q14201 252 aaPredicted RBP17.66■□□□□ 0.42
C11orf88-202ENST00000375618 PPP4R3CPQ6ZMV5 832 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 LRRC55Q6ZSA7 311 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 CMTR2Q8IYT2 770 aaKnown RBP17.66■□□□□ 0.42
C11orf88-202ENST00000375618 FIBCD1Q8N539 461 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 DEPTORQ8TB45 409 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 GDPD5Q8WTR4 605 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 CASD1Q96PB1 797 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 PANK2Q9BZ23 570 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 FAM105AQ9NUU6 356 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 DACT1Q9NYF0 836 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
C11orf88-202ENST00000375618 TBKBP1A7MCY6 615 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 ERLIN2O94905 339 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 EPC2Q52LR7 807 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 TAS1R3Q7RTX0 852 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 TMEM192Q8IY95 271 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 SMG8Q8ND04 991 aaKnown RBP17.65■□□□□ 0.42
C11orf88-202ENST00000375618 RASSF8Q8NHQ8 419 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
C11orf88-202ENST00000375618 REEP2Q9BRK0 252 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 PCDHA7Q9UN72 937 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 PCDHB2Q9Y5E7 798 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 NLRC5Q86WI3 1866 aa17.65■□□□□ 0.42
C11orf88-202ENST00000375618 CUTAO60888 179 aa17.64■□□□□ 0.41
C11orf88-202ENST00000375618 ZNF623O75123 536 aa17.64■□□□□ 0.41
C11orf88-202ENST00000375618 FOSL2P15408 326 aa17.64■□□□□ 0.41
C11orf88-202ENST00000375618 LIG1P18858 919 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms