RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 H3BNC9 293 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 SLC26A4O43511 780 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 RB1P06400 928 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 SKIP12755 728 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 PDIA4P13667 645 aaKnown RBP24.11■■□□□ 1.45
NINJ1-201ENST00000375446 ATF7P17544 494 aaPredicted RBP24.11■■□□□ 1.45
NINJ1-201ENST00000375446 UBA7P41226 1012 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 GPM6BQ13491 265 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 SPRYD3Q8NCJ5 442 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 PLIN2Q99541 437 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 TMEM117Q9H0C3 514 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 FAM105AQ9NUU6 356 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 LMCD1Q9NZU5 365 aa24.11■■□□□ 1.45
NINJ1-201ENST00000375446 TSPAN1O60635 241 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 RAB27AP51159 221 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 CEBPZQ03701 1054 aaKnown RBP24.1■■□□□ 1.45
NINJ1-201ENST00000375446 TMEM119Q4V9L6 283 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 ABI1Q8IZP0 508 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 BSNDQ8WZ55 320 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 KIFAP3Q92845 792 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 CASD1Q96PB1 797 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 USP28Q96RU2 1077 aa24.1■■□□□ 1.45
NINJ1-201ENST00000375446 C11orf84Q9BUA3 381 aaPredicted RBP24.1■■□□□ 1.45
NINJ1-201ENST00000375446 ZNF623O75123 536 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 MARCKSP29966 332 aaPredicted RBP24.09■■□□□ 1.45
NINJ1-201ENST00000375446 AXLP30530 894 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 NCBP1Q09161 790 aaKnown RBP24.09■■□□□ 1.45
NINJ1-201ENST00000375446 AMHR2Q16671 573 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 CLLU1OSQ5K130 101 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 CALML4Q96GE6 196 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 RUSC1Q9BVN2 902 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 PLVAPQ9BX97 442 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 POLD4Q9HCU8 107 aa24.09■■□□□ 1.45
NINJ1-201ENST00000375446 NAMPTP43490 491 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 PPP2R5AQ15172 486 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 UBXN11Q5T124 520 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 CDCA2Q69YH5 1023 aaPredicted RBP24.08■■□□□ 1.45
NINJ1-201ENST00000375446 RINT1Q6NUQ1 792 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 C1orf186Q6ZWK4 172 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 ZBTB8OSQ8IWT0 167 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 CCDC51Q96ER9 411 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 IFT74Q96LB3 600 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 C2orf40Q9H1Z8 148 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 TYW1Q9NV66 732 aaKnown RBP24.08■■□□□ 1.45
NINJ1-201ENST00000375446 FBXO2Q9UK22 296 aaPredicted RBP24.08■■□□□ 1.45
NINJ1-201ENST00000375446 PCDHB2Q9Y5E7 798 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 SRPRBQ9Y5M8 271 aaKnown RBP24.08■■□□□ 1.45
NINJ1-201ENST00000375446 TRANK1O15050 2925 aa24.08■■□□□ 1.45
NINJ1-201ENST00000375446 COL4A4P53420 1690 aaPredicted RBP24.08■■□□□ 1.44
NINJ1-201ENST00000375446 EYSQ5T1H1 3165 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 SSBP05455 408 aaKnown RBP eCLIP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 ZSCAN22P10073 491 aaPredicted RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 SLC39A14Q15043 492 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 PTPROQ16827 1216 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 SPOUT1Q5T280 376 aaKnown RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 FOXD4L5Q5VV16 416 aaPredicted RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 NOTUMQ6P988 496 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 SYT2Q8N9I0 419 aaPredicted RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 SLC17A8Q8NDX2 589 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 DEPTORQ8TB45 409 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 HELQQ8TDG4 1101 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 FOXD4L4Q8WXT5 416 aaPredicted RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 LPPQ93052 612 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 CPB2Q96IY4 423 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 CSRNP2Q9H175 543 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 HCSTQ9UBK5 93 aa24.07■■□□□ 1.44
NINJ1-201ENST00000375446 PRRC2BQ5JSZ5 2229 aaKnown RBP24.07■■□□□ 1.44
NINJ1-201ENST00000375446 B4GALT5O43286 388 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 HIP1RO75146 1068 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 PLA2G4BP0C869 781 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 ARF4P18085 180 aaPredicted RBP24.06■■□□□ 1.44
NINJ1-201ENST00000375446 LONRF3Q496Y0 759 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 DAW1Q8N136 415 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 LRRC43Q8N309 656 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 RASSF8Q8NHQ8 419 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 P2RX5Q93086 422 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 PGBD4Q96DM1 585 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 MRPL38Q96DV4 380 aaKnown RBP24.06■■□□□ 1.44
NINJ1-201ENST00000375446 FZD8Q9H461 694 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 CWH43Q9H720 699 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 AAASQ9NRG9 546 aa24.06■■□□□ 1.44
NINJ1-201ENST00000375446 PRMT7Q9NVM4 692 aaPredicted RBP24.06■■□□□ 1.44
NINJ1-201ENST00000375446 MORC2Q9Y6X9 1032 aaPredicted RBP24.06■■□□□ 1.44
NINJ1-201ENST00000375446 GRM6O15303 877 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 GUCY2CP25092 1073 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 NASPP49321 788 aaPredicted RBP24.05■■□□□ 1.44
NINJ1-201ENST00000375446 SLC12A3P55017 1021 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 KARSQ15046 597 aaKnown RBP24.05■■□□□ 1.44
NINJ1-201ENST00000375446 NAALADL2Q58DX5 795 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 GLB1LQ6UWU2 654 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 PPP4R3CPQ6ZMV5 832 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 LRRC55Q6ZSA7 311 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 MRPL10Q7Z7H8 261 aaKnown RBP24.05■■□□□ 1.44
NINJ1-201ENST00000375446 PRIMPOLQ96LW4 560 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 DRC1Q96MC2 740 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 ZNF396Q96N95 335 aaPredicted RBP24.05■■□□□ 1.44
NINJ1-201ENST00000375446 TIPINQ9BVW5 301 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 CCSER1Q9C0I3 900 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 PLAGL2Q9UPG8 496 aa24.05■■□□□ 1.44
NINJ1-201ENST00000375446 MEIS3P2A8K0S8 358 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms