RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ATP6V1C1P21283 382 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 EIF4A3P38919 411 aaKnown RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 CLCN2P51788 898 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 LONRF3Q496Y0 759 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 HABP4Q5JVS0 413 aaKnown RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 MFAP3LO75121 409 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 STX5Q13190 355 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CATSPER3Q86XQ3 398 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 SH3BP1Q9Y3L3 701 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 PIK3CDO00329 1044 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 GPBP1Q86WP2 473 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 AHI1Q8N157 1196 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 CHCHD4Q8N4Q1 142 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 ZHX2Q9Y6X8 837 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 NLRP6P59044 892 aa7.02□□□□□ -1.29
UBR4-204ENST00000375254 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 FBXO9Q9UK97 447 aaPredicted RBP7.02□□□□□ -1.29
UBR4-204ENST00000375254 TRIM43BA6NCK2 446 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SAMD3Q8N6K7 520 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PICK1Q9NRD5 415 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 KIF17Q9P2E2 1029 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SGK1O00141 431 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 TNFAIP2Q03169 654 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 TRIP10Q15642 601 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CCDC36Q8IYA8 594 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 LARP4BQ92615 738 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 TTC17Q96AE7 1141 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 REXO4Q9GZR2 422 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 SOX13Q9UN79 622 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PENKP01210 267 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 SLCO1A2P46721 670 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 MFAP3P55082 362 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CLEC4FQ8N1N0 589 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 FRMD8Q9BZ67 464 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 NOL6Q9H6R4 1146 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 GPBP1L1Q9HC44 474 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 SLC52A1Q9NWF4 448 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SNPHO15079 494 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PHGDHO43175 533 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 ILF2Q12905 390 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 TYSND1Q2T9J0 566 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PSEN1P49768 467 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 BICRALQ6AI39 1079 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.01□□□□□ -1.292e-7■■■■■ 58
UBR4-204ENST00000375254 MRPL44Q9H9J2 332 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 TUBGCP4Q9UGJ1 667 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CROTQ9UKG9 612 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ITGA1P56199 1179 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 KRT40Q6A162 431 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ERP27Q96DN0 273 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PUDPQ08623 228 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 DIS3L2Q8IYB7 885 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 ATP6V1E2Q96A05 226 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 RABL2AQ9UBK7 228 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 A0A0B4J269 797 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 NOTOA8MTQ0 251 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SLCO1B7G3V0H7 640 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ALBP02768 609 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 XPAP23025 273 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 GNL1P36915 607 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 TUBB3Q13509 450 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 KIAA0408Q6ZU52 694 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CABP1Q9NZU7 370 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 NSD2O96028 1365 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 GAS2O43903 313 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 GAS7O60861 476 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PARNO95453 639 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 ZBED1O96006 694 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 VSNL1P62760 191 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 KCTD21Q4G0X4 260 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SCUBE1Q8IWY4 988 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 NMD3Q96D46 503 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 SLC6A15Q9H2J7 730 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 RAPH1Q70E73 1250 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CCDC117Q8IWD4 279 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 TOR1AIP2Q8NFQ8 470 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 MANSC1Q9H8J5 431 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ABHD10Q9NUJ1 306 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 RABL2BQ9UNT1 228 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 H2AFYO75367 372 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 IL6P05231 212 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ELF3P78545 371 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 ZNF568Q3ZCX4 644 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SLFN12Q8IYM2 578 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 MAGEB18Q96M61 343 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 VPS45Q9NRW7 570 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 CRNNQ9UBG3 495 aaPredicted RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 CHN1P15882 459 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 PIK3R1P27986 724 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 DMC1Q14565 340 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 MZT2BQ6NZ67 158 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 KSR2Q6VAB6 950 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 ITPKCQ96DU7 683 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 SERTAD1Q9UHV2 236 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 TRMT6Q9UJA5 497 aaKnown RBP7.01□□□□□ -1.29
UBR4-204ENST00000375254 PFASO15067 1338 aa7.01□□□□□ -1.29
UBR4-204ENST00000375254 TRIM67Q6ZTA4 783 aa7□□□□□ -1.29
UBR4-204ENST00000375254 NOP9Q86U38 636 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms