RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 DGKIO75912 1065 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 GUCY2CP25092 1073 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 HOXA11P31270 313 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 TXLNAP40222 546 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 RAD51AP2Q09MP3 1159 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 MAPK7Q13164 816 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 DHX8Q14562 1220 aaKnown RBP23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 GRIN2CQ14957 1233 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 ARSHQ5FYA8 562 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 AXDND1Q5T1B0 1012 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 SP7Q8TDD2 431 aaPredicted RBP23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 PANK2Q9BZ23 570 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 AGPAT5Q9NUQ2 364 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 DACT1Q9NYF0 836 aa23.22■■□□□ 1.31
MAP1LC3A-202ENST00000374837 NPHP3-ACAD11A0A0J9YXS1 232 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 NAMPTP43490 491 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 PPP2R5AQ15172 486 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 PCBP1Q15365 356 aaKnown RBP eCLIP23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 RRAGBQ5VZM2 374 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 CDCA2Q69YH5 1023 aaPredicted RBP23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 ZNF689Q96CS4 500 aaPredicted RBP23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 IFT74Q96LB3 600 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 TIPINQ9BVW5 301 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 ELAC1Q9H777 363 aaKnown RBP23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 RC3H2Q9HBD1 1191 aaKnown RBP23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 KCND2Q9NZV8 630 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 PCDHA7Q9UN72 937 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 ATP6V1DQ9Y5K8 247 aa23.21■■□□□ 1.31
MAP1LC3A-202ENST00000374837 PTPRSQ13332 1948 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 A0A087X0B3 334 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 A0A0U1RQF3 1178 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 LINC01553A4QN01 128 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SFI1A8K8P3 1242 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TSPAN1O60635 241 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NUCB2P80303 420 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 AMHR2Q16671 573 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NAALADL2Q58DX5 795 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TWF2Q6IBS0 349 aaKnown RBP23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SHC4Q6S5L8 630 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 SPRED2Q7Z698 418 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 GPBP1Q86WP2 473 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ECHDC2Q86YB7 292 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ZBTB8OSQ8IWT0 167 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 DEPTORQ8TB45 409 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 LARP4BQ92615 738 aaKnown RBP23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 DRC1Q96MC2 740 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TRAIPQ9BWF2 469 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 C2orf40Q9H1Z8 148 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 RNF216Q9NWF9 866 aaPredicted RBP23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TMEM161AQ9NX61 479 aa23.2■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ERLIN2O94905 339 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NCLP19338 710 aaKnown RBP23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ME1P48163 572 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 GATMP50440 423 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PEX3P56589 373 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 KRT85P78386 507 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 KIFC3Q9BVG8 833 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 FZD8Q9H461 694 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CERS4Q9HA82 394 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 STK17AQ9UEE5 414 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 LOXHD1Q8IVV2 1947 aa23.19■■□□□ 1.3
MAP1LC3A-202ENST00000374837 AXLP30530 894 aa23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NPTX2P47972 431 aa23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CACNB1Q02641 598 aaPredicted RBP23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CCDC73Q6ZRK6 1079 aa23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ZNF598Q86UK7 904 aaKnown RBP23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 LEO1Q8WVC0 666 aaPredicted RBP23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CPB2Q96IY4 423 aa23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CDX2Q99626 313 aaPredicted RBP23.18■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ADGRA3Q8IWK6 1321 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 TTC3P53804 2025 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CCDC169A6NNP5 214 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 B4GALT5O43286 388 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ATF7P17544 494 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 NCBP1Q09161 790 aaKnown RBP23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 BTG3Q14201 252 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 FAM187BQ17R55 369 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 UBXN11Q5T124 520 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PPP4R3CPQ6ZMV5 832 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 FIBCD1Q8N539 461 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PDILTQ8N807 584 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 RNF169Q8NCN4 708 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CCDC113Q9H0I3 377 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRDM12Q9H4Q4 367 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 C17orf75Q9HAS0 396 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 FAM105AQ9NUU6 356 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 RNF19AQ9NV58 838 aa23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PRMT7Q9NVM4 692 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-202ENST00000374837 EYSQ5T1H1 3165 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ZNF623O75123 536 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 EOMESO95936 686 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 FGFR1P11362 822 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PLS3P13797 630 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ARF4P18085 180 aaPredicted RBP23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 STAT6P42226 847 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 ERVK-21P61565 698 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 DMP1Q13316 513 aaPredicted RBP23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 GIT2Q14161 759 aa23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 PAN2Q504Q3 1202 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-202ENST00000374837 CMTR2Q8IYT2 770 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms