RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 XXYLT1Q8NBI6 393 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 IFIH1Q9BYX4 1025 aaKnown RBP13.72□□□□□ -0.21
PRPF4-202ENST00000374199 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 ADGRA2Q96PE1 1338 aa13.72□□□□□ -0.21
PRPF4-202ENST00000374199 PEX10O60683 326 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 SNAPC2Q13487 334 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 NAB2Q15742 525 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 MAMDC4Q6UXC1 1216 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 PLPPR4Q7Z2D5 763 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
PRPF4-202ENST00000374199 ANKRD35Q8N283 1001 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 EXOC7Q9UPT5 735 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
PRPF4-202ENST00000374199 KIAA0391O15091 583 aaKnown RBP13.71□□□□□ -0.21
PRPF4-202ENST00000374199 OSBPP22059 807 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 DMP1Q13316 513 aaPredicted RBP13.71□□□□□ -0.21
PRPF4-202ENST00000374199 PRKG1Q13976 671 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 CCDC122Q5T0U0 273 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 TXLNBQ8N3L3 684 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 RABGGTAQ92696 567 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 CCDC113Q9H0I3 377 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF302Q9NR11 478 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 APEX2Q9UBZ4 518 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 DUSP10Q9Y6W6 482 aa13.71□□□□□ -0.21
PRPF4-202ENST00000374199 ANKRD63C9JTQ0 380 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.22
PRPF4-202ENST00000374199 ADRB2P07550 413 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.22
PRPF4-202ENST00000374199 PEX3P56589 373 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 ANKRD23Q86SG2 305 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 GPR20Q99678 358 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.22
PRPF4-202ENST00000374199 PDCL3Q9H2J4 239 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 RAB21Q9UL25 225 aa13.71□□□□□ -0.22
PRPF4-202ENST00000374199 TISP43B9A030 160 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 POTEB2H3BUK9 544 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 SLC16A4O15374 487 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 FAM189A1O60320 539 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 ARIH2O95376 493 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 IGHA2P01877 340 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 NAMPTP43490 491 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 DLG4P78352 724 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 IRX3P78415 501 aaPredicted RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 PTK2Q05397 1052 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 GFPT1Q06210 699 aaPredicted RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CEP112Q8N8E3 955 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CEP170P1Q96L14 293 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 DIS3Q9Y2L1 958 aaKnown RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 A0A087X0T9 212 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
PRPF4-202ENST00000374199 FAM228BP0C875 321 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 VAMP7P51809 220 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 IRF5Q13568 498 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 EMC2Q15006 297 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CYFIP1Q7L576 1253 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 ZSWIM2Q8NEG5 633 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CARD6Q9BX69 1037 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 JRKLQ9Y4A0 524 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 MGAMO43451 1857 aa13.7□□□□□ -0.22
PRPF4-202ENST00000374199 CNGA1P29973 690 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 SOX5P35711 763 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 GPC3P51654 580 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 SMTNP53814 917 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 PLS1Q14651 629 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 ELF2Q15723 593 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 ASIC2Q16515 512 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 NCANO14594 1321 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 CES2O00748 559 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 GAS2O43903 313 aaKnown RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 GRIN3BO60391 1043 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 FERP16591 822 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 SPA17Q15506 151 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 FAM102BQ5T8I3 360 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 NLRC4Q9NPP4 1024 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 ZRANB2O95218 330 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRPF4-202ENST00000374199 GLRA2P23416 452 aa13.69□□□□□ -0.22
PRPF4-202ENST00000374199 MYL7Q01449 175 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms