RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CRLF3Q8IUI8 442 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 ELMOD1Q8N336 334 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 SH2D3AQ9BRG2 576 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 PCDHA13Q9Y5I0 950 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 ADGRB3O60242 1522 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 LIFRP42702 1097 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 DRP2Q13474 957 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 MAN2A1Q16706 1144 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 TMPRSS15P98073 1019 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 ITPK1Q13572 414 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 MAPK6Q16659 721 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 ARMCX2Q7L311 632 aa15.28■□□□□ 0.04
TRAF1-201ENST00000373887 SRPRBQ9Y5M8 271 aaKnown RBP15.28■□□□□ 0.04
TRAF1-201ENST00000373887 PHKA2P46019 1235 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 SLC9A5Q14940 896 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 NECTIN1Q15223 517 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 NEK9Q8TD19 979 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 ZFYVE19Q96K21 471 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 MRPL47Q9HD33 250 aaKnown RBP15.27■□□□□ 0.04
TRAF1-201ENST00000373887 FGFR1OP2Q9NVK5 253 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 QRICH2Q9H0J4 1663 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 ANKRD65E5RJM6 399 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 GOLGA8MH3BSY2 632 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 GYS2P54840 703 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 TMEM62Q0P6H9 643 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 POTEEQ6S8J3 1075 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
TRAF1-201ENST00000373887 TAGAPQ8N103 731 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 EDEM3Q9BZQ6 932 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 SUN2Q9UH99 717 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 SPHKAPQ2M3C7 1700 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 DPYSL4O14531 572 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 TAC1P20366 129 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAF1-201ENST00000373887 FMO2Q99518 471 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
TRAF1-201ENST00000373887 SLC24A3Q9HC58 644 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 KCNH4Q9UQ05 1017 aa15.27■□□□□ 0.04
TRAF1-201ENST00000373887 SNX2O60749 519 aa15.27■□□□□ 0.03
TRAF1-201ENST00000373887 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
TRAF1-201ENST00000373887 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.03
TRAF1-201ENST00000373887 PARD6BQ9BYG5 372 aa15.27■□□□□ 0.03
TRAF1-201ENST00000373887 GIMAP8Q8ND71 665 aaPredicted RBP15.27■□□□□ 0.03
TRAF1-201ENST00000373887 PBKQ96KB5 322 aa15.27■□□□□ 0.03
TRAF1-201ENST00000373887 TTC25Q96NG3 672 aa15.27■□□□□ 0.03
TRAF1-201ENST00000373887 SAYSD1Q9NPB0 183 aa15.27■□□□□ 0.03
TRAF1-201ENST00000373887 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 CDC25BP30305 580 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 UBE3AQ05086 875 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 IMPG1Q17R60 797 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 CATSPER3Q86XQ3 398 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 GRIN3BO60391 1043 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 DMTNQ08495 405 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 SARS2Q9NP81 518 aaKnown RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 NFU1Q9UMS0 254 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 TAF1BQ53T94 588 aaPredicted RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 CENPUQ71F23 418 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 ACTR5Q9H9F9 607 aaPredicted RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 SLC8A2Q9UPR5 921 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 ARHGEF9O43307 516 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 CDC27P30260 824 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 HUNKP57058 714 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 YIPF3Q9GZM5 350 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 GYG2O15488 501 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 LDHDQ86WU2 507 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 SRRM1Q8IYB3 904 aaKnown RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 OTULINQ96BN8 352 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
TRAF1-201ENST00000373887 TRIM55Q9BYV6 548 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
TRAF1-201ENST00000373887 PP2D1A8MPX8 630 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 PSMA2P25787 234 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 GCLMP48507 274 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 GPC3P51654 580 aa15.25■□□□□ 0.03
TRAF1-201ENST00000373887 LBRQ14739 615 aaKnown RBP15.25■□□□□ 0.03
TRAF1-201ENST00000373887 CCHCR1Q8TD31 782 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms