RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 RWDD3Q9Y3V2 267 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
HDAC8-201ENST00000373554 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
HDAC8-201ENST00000373554 CHD9Q3L8U1 2897 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
HDAC8-201ENST00000373554 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-201ENST00000373554 YEATS4O95619 227 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 IGFBP4P22692 258 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 NAMPTP43490 491 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 FAM189BP81408 668 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 MBTD1Q05BQ5 628 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 PKP1Q13835 747 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 ECHDC2Q86YB7 292 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
HDAC8-201ENST00000373554 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 DEPTORQ8TB45 409 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 C17orf80Q9BSJ5 609 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 TIPINQ9BVW5 301 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 TRAIPQ9BWF2 469 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 FAM105AQ9NUU6 356 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 KCND2Q9NZV8 630 aa13.3□□□□□ -0.28
HDAC8-201ENST00000373554 COL4A4P53420 1690 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 CDH23Q9H251 3354 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 TBKBP1A7MCY6 615 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 TSPAN1O60635 241 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 EOMESO95936 686 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 PLA2G4BP0C869 781 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 FGFR1P11362 822 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 PLCG1P19174 1290 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 AXLP30530 894 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 CTNNB1P35222 781 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 GATMP50440 423 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 KARSQ15046 597 aaKnown RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 EPC2Q52LR7 807 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 SYT2Q8N9I0 419 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 LINC00301Q8NCQ3 95 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 GDPD5Q8WTR4 605 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 BSNDQ8WZ55 320 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 PRIMPOLQ96LW4 560 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
HDAC8-201ENST00000373554 CCDC39Q9UFE4 941 aa13.29□□□□□ -0.28
HDAC8-201ENST00000373554 RALGAPA2Q2PPJ7 1873 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 RFXAPO00287 272 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 SPTLC2O15270 562 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 HIP1RO75146 1068 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 PPP6R2O75170 966 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 GUCY2CP25092 1073 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 EFNA5P52803 228 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 ADGRE1Q14246 886 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 MAPK6Q16659 721 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 ATL3Q6DD88 541 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 ZNF598Q86UK7 904 aaKnown RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 LRRC43Q8N309 656 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 RSPH1Q8WYR4 309 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 SYMPKQ92797 1274 aaKnown RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 CLP1Q92989 425 aaKnown RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 EPSTI1Q96J88 318 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 C11orf84Q9BUA3 381 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 C17orf75Q9HAS0 396 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 CFAP45Q9UL16 551 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 PCDHB2Q9Y5E7 798 aa13.28□□□□□ -0.28
HDAC8-201ENST00000373554 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
HDAC8-201ENST00000373554 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 ZNF623O75123 536 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 RB1P06400 928 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 ATF7P17544 494 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 LIG1P18858 919 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 PEX3P56589 373 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 AMHR2Q16671 573 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 SPOUT1Q5T280 376 aaKnown RBP13.27□□□□□ -0.29
HDAC8-201ENST00000373554 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 DAW1Q8N136 415 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 CNNM3Q8NE01 707 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.29
HDAC8-201ENST00000373554 LARP4BQ92615 738 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms