RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SOCS7O14512 581 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 MAPK13O15264 365 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 ADSSP30520 456 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 RTP1P59025 263 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 Q3C1V9 767 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 SAR1BQ9Y6B6 198 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 FARP2O94887 1054 aaPredicted RBP21.34■■□□□ 1.01
HDAC1-201ENST00000373548 GJA5P36382 358 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 C1orf220Q5T0J3 134 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.34■■□□□ 1.01
HDAC1-201ENST00000373548 FASTKD5Q7L8L6 764 aaKnown RBP21.34■■□□□ 1.01
HDAC1-201ENST00000373548 GPR161Q8N6U8 529 aaKnown RBP21.34■■□□□ 1.01
HDAC1-201ENST00000373548 LMO3Q8TAP4 145 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 PLEKHO2Q8TD55 490 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 FGD4Q96M96 766 aa21.34■■□□□ 1.01
HDAC1-201ENST00000373548 LUC7LQ9NQ29 371 aaKnown RBP21.34■■□□□ 1.01
HDAC1-201ENST00000373548 EMSYQ7Z589 1322 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 IGKV6D-21A0A0A0MT36 114 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 OATP04181 439 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 ADRB2P07550 413 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 PNMA6AP0CW24 399 aaPredicted RBP21.33■■□□□ 1.01
HDAC1-201ENST00000373548 ZSCAN20P17040 1043 aaPredicted RBP21.33■■□□□ 1.01
HDAC1-201ENST00000373548 PPP3CAQ08209 521 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 LDLRAD1Q5T700 205 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 ARID3AQ99856 593 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 POLR3FQ9H1D9 316 aaPredicted RBP21.33■■□□□ 1.01
HDAC1-201ENST00000373548 DNAJC12Q9UKB3 198 aa21.33■■□□□ 1.01
HDAC1-201ENST00000373548 GSTTP1A0A1W2PQM5 241 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 GOLGA8IPA6NC78 632 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 GOLGA8JA6NMD2 632 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 PGK2P07205 417 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 OSBPP22059 807 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 CNGA1P29973 690 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 SLC39A4Q6P5W5 647 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 STK33Q9BYT3 514 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 ZNFX1Q9P2E3 1918 aaKnown RBP21.32■■□□□ 1
HDAC1-201ENST00000373548 F8VZ95 297 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 SRGAP2O75044 1071 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 STAT1P42224 750 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 EMC2Q15006 297 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 PCYT2Q99447 389 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 APEX2Q9UBZ4 518 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 JRKLQ9Y4A0 524 aa21.32■■□□□ 1
HDAC1-201ENST00000373548 CTAGE15A4D2H0 777 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 CTAGE8P0CG41 777 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 FERP16591 822 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 COPB2P35606 906 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 CLCN6P51797 869 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 MCCD1P59942 119 aaPredicted RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 EEPD1Q7L9B9 569 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 CTAGE6Q86UF2 777 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 CBWD2Q8IUF1 395 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 CTAGE4Q8IX94 777 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 RNF10Q8N5U6 811 aaKnown RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 CCDC94Q9BW85 323 aaPredicted RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 PACSIN1Q9BY11 444 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 MCM3APO60318 1980 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 N4BP1O75113 896 aaKnown RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 GFPT2O94808 682 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 TGFB3P10600 412 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 SOX5P35711 763 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 POLGP54098 1239 aaPredicted RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 NEDD9Q14511 834 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 DRAP1Q14919 205 aaPredicted RBP21.31■■□□□ 1
HDAC1-201ENST00000373548 TAS1R3Q7RTX0 852 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 SAAL1Q96ER3 474 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 IFT74Q96LB3 600 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 ALS2CR12Q96Q35 445 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 GPR88Q9GZN0 384 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 ARHGAP28Q9P2N2 729 aa21.31■■□□□ 1
HDAC1-201ENST00000373548 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
HDAC1-201ENST00000373548 DNAJC25-GNG10A0A024R161 153 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 P4HA2O15460 535 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 BUB1O43683 1085 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 KLRC1P26715 233 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 ANXA13P27216 316 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 GCLMP48507 274 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 NAB2Q15742 525 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 SNRNP35Q16560 246 aaKnown RBP21.3■■□□□ 1
HDAC1-201ENST00000373548 KIAA0753Q2KHM9 967 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 PHLDB3Q6NSJ2 640 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 NOX5Q96PH1 765 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 CEP89Q96ST8 783 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 NIFKQ9BYG3 293 aaKnown RBP21.3■■□□□ 1
HDAC1-201ENST00000373548 DHX33Q9H6R0 707 aaKnown RBP21.3■■□□□ 1
HDAC1-201ENST00000373548 NENFQ9UMX5 172 aa21.3■■□□□ 1
HDAC1-201ENST00000373548 IQCA1LA6NCM1 817 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 EVI5O60447 810 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 GGPS1O95749 300 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 EPC2Q52LR7 807 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 ZNF446Q9NWS9 450 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 NAGPAQ9UK23 515 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 DAAM1Q9Y4D1 1078 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 SNAPC2Q13487 334 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 LY6KQ17RY6 165 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 C10orf76Q5T2E6 689 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 TMEM143Q96AN5 459 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 MMP19Q99542 508 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 PARD6BQ9BYG5 372 aa21.29■■□□□ 1
HDAC1-201ENST00000373548 SNX12Q9UMY4 172 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms