RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 KCTD2Q14681 263 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 AK8Q96MA6 479 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 SH3GL3Q99963 347 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 PACSIN1Q9BY11 444 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 PANK4Q9NVE7 773 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 AMACRQ9UHK6 382 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 SIK3Q9Y2K2 1263 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 PJA2O43164 708 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 SART1O43290 800 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 TBC1D12O60347 775 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 AP1G2O75843 785 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 UPP2O95045 317 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 VCAM1P19320 739 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 HNRNPH3P31942 346 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 CUL1Q13616 776 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 GNPTABQ3T906 1256 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 TAX1BP1Q86VP1 789 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 MAB21L3Q8N8X9 362 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
RPRD1B-201ENST00000373433 COL4A1P02462 1669 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 CHD4Q14839 1912 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 C5orf60A6NFR6 353 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 H0YGN5 161 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 GHRP10912 638 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 PRCCQ92733 491 aaPredicted RBP12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 NFS1Q9Y697 457 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 KRIT1O00522 736 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 FAM13AO94988 1023 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 MYBL1P10243 752 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 CHN1P15882 459 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 POLR2FP61218 127 aaKnown RBP12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 SFMBT2Q5VUG0 894 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 DNAAF5Q86Y56 855 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 UHMK1Q8TAS1 419 aaKnown RBP12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 PLCD4Q9BRC7 762 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 RRAGCQ9HB90 399 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 LRRC4CQ9HCJ2 640 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 RREB1Q92766 1687 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 HERC4Q5GLZ8 1057 aaPredicted RBP12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 NELFCDQ8IXH7 590 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 KBTBD4Q9NVX7 518 aa12.07□□□□□ -0.48
RPRD1B-201ENST00000373433 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 MAP1BP46821 2468 aaKnown RBP12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 LCA5LO95447 670 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 FDX1P10109 184 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CA8P35219 290 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 KCNJ2P63252 427 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 MEI1Q5TIA1 1274 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 TRIM68Q6AZZ1 485 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 USP50Q70EL3 339 aaPredicted RBP12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 KIF2BQ8N4N8 673 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 IQCDQ96DY2 449 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 TEKT3Q9BXF9 490 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 EBF2Q9HAK2 575 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CPSF2Q9P2I0 782 aaKnown RBP12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 ARHGEF35A5YM69 484 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 YBX3P16989 372 aaKnown RBP eCLIP12.06□□□□□ -0.488e-7■■□□□ 12.2
RPRD1B-201ENST00000373433 C11orf91Q3C1V1 193 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CELF4Q9BZC1 486 aaKnown RBP12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 KDM3AQ9Y4C1 1321 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 GLTPD2A6NH11 291 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CAND2O75155 1236 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 PTPRAP18433 802 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 ECHS1P30084 290 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 CCNA1P78396 465 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 NAB2Q15742 525 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 DLK2Q6UY11 383 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 LRRC34Q8IZ02 419 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 LRRC15Q8TF66 581 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 BAP1Q92560 729 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 ZNF570Q96NI8 536 aa12.06□□□□□ -0.48
RPRD1B-201ENST00000373433 MYH7BA7E2Y1 1941 aa12.05□□□□□ -0.48
RPRD1B-201ENST00000373433 MEIS1O00470 390 aa12.05□□□□□ -0.48
RPRD1B-201ENST00000373433 NOP56O00567 594 aaKnown RBP12.05□□□□□ -0.48
RPRD1B-201ENST00000373433 TTI1O43156 1089 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms