RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GLI3P10071 1580 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 GTPBP6O43824 516 aaPredicted RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 STK10O94804 968 aaKnown RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 STX3Q13277 289 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 KCNB1Q14721 858 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 RGS9BPQ6ZS82 235 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 FOXP4Q8IVH2 680 aaPredicted RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 AMNQ9BXJ7 453 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 TDRD3Q9H7E2 651 aaKnown RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 ZNRF3Q9ULT6 936 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 CARD8Q9Y2G2 431 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 TBKBP1A7MCY6 615 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 KCNK3O14649 394 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 MIGA2Q7L4E1 593 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 GPIHBP1Q8IV16 184 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 GSPT2Q8IYD1 628 aaKnown RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 ZFYVE19Q96K21 471 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 CCT8L2Q96SF2 557 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 ZNF341Q9BYN7 854 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 AS3MTQ9HBK9 375 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 FAM196BA6NMK8 535 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 MYCLP12524 364 aaPredicted RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 MORC3Q14149 939 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 COA7Q96BR5 231 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 BRD8Q9H0E9 1235 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 IFT122Q9HBG6 1241 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 PSMD14O00487 310 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 TTC4O95801 387 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 PPP4CP60510 307 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 ASIC2Q16515 512 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 LGSNQ5TDP6 509 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 SLFN12Q8IYM2 578 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 PGBD1Q96JS3 809 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 MAGEF1Q9HAY2 307 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 UBR3Q6ZT12 1888 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 PLSCR1O15162 318 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 XPOTO43592 962 aaKnown RBP7.04□□□□□ -1.28
CHD6-203ENST00000373233 MYBL1P10243 752 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 CNGA3Q16281 694 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 CALML6Q8TD86 181 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 CCT6BQ92526 530 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 FAM192AQ9GZU8 254 aa7.04□□□□□ -1.28
CHD6-203ENST00000373233 C4AP0C0L4 1744 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 H0YC42 278 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ATP4AP20648 1035 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 RASA1P20936 1047 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 CCNHP51946 323 aaPredicted RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 TUBA1BP68363 451 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 PPP1R18Q6NYC8 613 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 KLC3Q6P597 504 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 PDXDC1Q6P996 788 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ARHGEF18Q6ZSZ5 1173 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 TUBA1AQ71U36 451 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 OR8K1Q8NGG5 319 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ANKRD27Q96NW4 1050 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 EPB41L5Q9HCM4 733 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 FANCLQ9NW38 375 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 DSEQ9UL01 958 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 SSX2IPQ9Y2D8 614 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NUMA1Q14980 2115 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 RPN1P04843 607 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 BMP3P12645 472 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 TECP42680 631 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 EIF3BP55884 814 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 PPP2R2AP63151 447 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ADCK1Q86TW2 530 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 CPXCR1Q8N123 301 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NEK9Q8TD19 979 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 IL1RAPL1Q9NZN1 696 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ZMYND8Q9ULU4 1186 aaPredicted RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 HPCAL4Q9UM19 191 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NOVA2Q9UNW9 492 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 USP27XA6NNY8 438 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NAA35Q5VZE5 725 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NXNQ6DKJ4 435 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 NLRP9Q7RTR0 991 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 SRBD1Q8N5C6 995 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 FBXO9Q9UK97 447 aaPredicted RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 THSD7AQ9UPZ6 1657 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 WTIPA6NIX2 430 aaPredicted RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 GAS7O60861 476 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 GRK2P25098 689 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 TRMT1LQ7Z2T5 733 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 TMEM110Q86TL2 294 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 QKIQ96PU8 341 aaKnown RBP eCLIP7.03□□□□□ -1.286e-7■■■■■ 27.5
CHD6-203ENST00000373233 C15orf41Q9Y2V0 281 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 MAP1BP46821 2468 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 HNRNPCL2B2RXH8 293 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 HNRNPCL1O60812 293 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 MAGEA1P43355 309 aa7.03□□□□□ -1.28
CHD6-203ENST00000373233 TRIM25Q14258 630 aaKnown RBP7.03□□□□□ -1.28
CHD6-203ENST00000373233 TMED2Q15363 201 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms