RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ERP44Q9BS26 406 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 RANBP17Q9H2T7 1088 aaKnown RBP13.8□□□□□ -0.2
CTPS1-202ENST00000372621 PPANQ9NQ55 473 aaKnown RBP13.8□□□□□ -0.2
CTPS1-202ENST00000372621 ARP10275 920 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 TMOD1P28289 359 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 DR1Q01658 176 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 TLCD1Q96CP7 247 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 FMO2Q99518 471 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 WDR11Q9BZH6 1224 aa13.8□□□□□ -0.2
CTPS1-202ENST00000372621 TMX4Q9H1E5 349 aaPredicted RBP13.8□□□□□ -0.2
CTPS1-202ENST00000372621 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
CTPS1-202ENST00000372621 DRG2P55039 364 aaKnown RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 UBXN2AP68543 259 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 DLG4P78352 724 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 ARHGAP44Q17R89 818 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 C11orf63Q6NUN7 778 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 RHOT2Q8IXI1 618 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 HOOK2Q96ED9 719 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 TMX2Q9Y320 296 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 C5orf60A6NFR6 353 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 FAM187AA6NFU0 413 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 HIP1RO75146 1068 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 HNRNPH1P31943 449 aaKnown RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 COPB2P35606 906 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 EIF3BP55884 814 aaKnown RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 DHX34Q14147 1143 aaKnown RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 CLUL1Q15846 466 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 SLC20A1Q8WUM9 679 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 CSRNP1Q96S65 589 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 LXNQ9BS40 222 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 ZNF577Q9BSK1 485 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 ALG6Q9Y672 507 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 CAPN7Q9Y6W3 813 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 EXOC3O60645 756 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 NUDT17P0C025 328 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 ZNF211Q13398 564 aaPredicted RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 GLG1Q92896 1179 aa13.79□□□□□ -0.2
CTPS1-202ENST00000372621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 DDX20Q9UHI6 824 aaKnown RBP13.79□□□□□ -0.2
CTPS1-202ENST00000372621 KIAA0391O15091 583 aaKnown RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 LRRN2O75325 713 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 PTGIRP43119 386 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 MAGOHP61326 146 aaKnown RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 SETQ01105 290 aaPredicted RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 PRPF4BQ13523 1007 aaKnown RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 ZDHHC24Q6UX98 284 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 MAGOHBQ96A72 148 aaKnown RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 BCCIPQ9P287 314 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 ATP8A1Q9Y2Q0 1164 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 AFF2P51816 1311 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 GOLGA6L10A0A0M3HER8 536 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 BCRP11274 1271 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 QPCTQ16769 361 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 AADACL2Q6P093 401 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 CCDC174Q6PII3 467 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 JAMLQ86YT9 394 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 RAPGEF5Q92565 580 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 PSMD1Q99460 953 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 TMOD4Q9NZQ9 345 aa13.78□□□□□ -0.2
CTPS1-202ENST00000372621 HERC5Q9UII4 1024 aaKnown RBP13.78□□□□□ -0.2
CTPS1-202ENST00000372621 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 P4HA2O15460 535 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 TRIM37O94972 964 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 PPP3CAQ08209 521 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 INTS8Q75QN2 995 aaKnown RBP13.77□□□□□ -0.2
CTPS1-202ENST00000372621 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.2
CTPS1-202ENST00000372621 C12orf56Q8IXR9 622 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 RDH13Q8NBN7 331 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 TEKT3Q9BXF9 490 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.2
CTPS1-202ENST00000372621 PCDHA3Q9Y5H8 950 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 GOLGB1Q14789 3259 aaKnown RBP13.77□□□□□ -0.2
CTPS1-202ENST00000372621 PFASO15067 1338 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 EMSYQ7Z589 1322 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.2
CTPS1-202ENST00000372621 ZNFX1Q9P2E3 1918 aaKnown RBP13.77□□□□□ -0.2
CTPS1-202ENST00000372621 MIF4GDA9UHW6 222 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 MAPTP10636 758 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 CTNNA2P26232 953 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 PEX5P50542 639 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 MCCD1P59942 119 aaPredicted RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 ACTN3Q08043 901 aaPredicted RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 IFT88Q13099 833 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 KRT35Q92764 455 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 RIT2Q99578 217 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 ARHGEF10LQ9HCE6 1279 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.21
CTPS1-202ENST00000372621 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 USP20Q9Y2K6 914 aa13.77□□□□□ -0.21
CTPS1-202ENST00000372621 ARHGEF35A5YM69 484 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms