RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 CLSTN1O94985 981 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 TMEM253P0C7T8 217 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 BACE1P56817 501 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 TNNC1P63316 161 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 PLA2G4FQ68DD2 849 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 JAK3P52333 1124 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 HNRNPH2P55795 449 aaKnown RBP22.34■■□□□ 1.17
VEGFA-204ENST00000372064 HAUS6Q7Z4H7 955 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 ZSWIM2Q8NEG5 633 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 SH3GL2Q99962 352 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 FDX1P10109 184 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 VAMP7P51809 220 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 NCKAP1LP55160 1127 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 PEX3P56589 373 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 AFAP1L1Q8TED9 768 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 EPB41L5Q9HCM4 733 aa22.34■■□□□ 1.17
VEGFA-204ENST00000372064 EMSYQ7Z589 1322 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 PSMC5P62195 406 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 ARHGAP44Q17R89 818 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 PEX26Q7Z412 305 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 NT5DC3Q86UY8 548 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 SCYL3Q8IZE3 742 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 RASGEF1CQ8N431 466 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 METTL13Q8N6R0 699 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 CALR3Q96L12 384 aaKnown RBP22.33■■□□□ 1.17
VEGFA-204ENST00000372064 TCEAL9Q9UHQ7 104 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 UTRNP46939 3433 aa22.33■■□□□ 1.17
VEGFA-204ENST00000372064 WDR64B1ANS9 1081 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 SLC16A4O15374 487 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 SFNP31947 248 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 ACTN2P35609 894 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 CARSP49589 748 aaKnown RBP22.33■■□□□ 1.16
VEGFA-204ENST00000372064 GUCY2DQ02846 1103 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 PAK2Q13177 524 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 EPC2Q52LR7 807 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 XKR9Q5GH70 373 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 C1orf220Q5T0J3 134 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 ALS2CLQ60I27 953 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 TSEN2Q8NCE0 465 aaKnown RBP22.33■■□□□ 1.16
VEGFA-204ENST00000372064 RFFLQ8WZ73 363 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 HES6Q96HZ4 224 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 HSPBP1Q9NZL4 362 aa22.33■■□□□ 1.16
VEGFA-204ENST00000372064 DOCK1Q14185 1865 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 PPP3CAQ08209 521 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 XXYLT1Q8NBI6 393 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 VTI1AQ96AJ9 217 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 WRNIP1Q96S55 665 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 USP20Q9Y2K6 914 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 ZSCAN5CA6NGD5 496 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-204ENST00000372064 PMM2O15305 246 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 LRRN2O75325 713 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 RPS6KA5O75582 802 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 KRT76Q01546 638 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 DCAF15Q66K64 600 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 ZNF280CQ8ND82 737 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 SLC17A8Q8NDX2 589 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 ANKEF1Q9NU02 776 aa22.32■■□□□ 1.16
VEGFA-204ENST00000372064 RAD51CO43502 376 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 CAPN2P17655 700 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 XRRA1Q6P2D8 792 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 DAAM2Q86T65 1068 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 IWS1Q96ST2 819 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.31■■□□□ 1.161e-12■■■□□ 14.6
VEGFA-204ENST00000372064 FAM170AA1A519 330 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 TMCO5BA8MYB1 307 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 PGRMC1O00264 195 aaKnown RBP22.31■■□□□ 1.16
VEGFA-204ENST00000372064 FOXN3O00409 490 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-204ENST00000372064 CEP104O60308 925 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 PTPRAP18433 802 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 PPATQ06203 517 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 FAM102BQ5T8I3 360 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 SLC35G2Q8TBE7 412 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 CASKIN2Q8WXE0 1202 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 PLEKHA4Q9H4M7 779 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 NFU1Q9UMS0 254 aa22.31■■□□□ 1.16
VEGFA-204ENST00000372064 BRCA1P38398 1863 aaKnown RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 GCLMP48507 274 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 HMGCS2P54868 508 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 CETN1Q12798 172 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 ZSCAN26Q16670 478 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 SNRNP48Q6IEG0 339 aaKnown RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 MREGQ8N565 214 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 GOLGA6L1Q8N7Z2 621 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 EIF1ADQ8N9N8 165 aaKnown RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 REPS2Q8NFH8 660 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 RDM1Q8NG50 284 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 PLEKHO2Q8TD55 490 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 BHMG1C9JSJ3 638 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 NR3C2P08235 984 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 VSIG10LQ86VR7 867 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 SENP7Q9BQF6 1050 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 OSGEPQ9NPF4 335 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 NOC2LQ9Y3T9 749 aaKnown RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 IGSF9BQ9UPX0 1349 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 ESYT3A0FGR9 886 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 ANO5Q75V66 913 aa22.3■■□□□ 1.16
VEGFA-204ENST00000372064 CTNNBL1Q8WYA6 563 aaPredicted RBP22.3■■□□□ 1.16
VEGFA-204ENST00000372064 PICK1Q9NRD5 415 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms