RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 DUX4L3P0CJ86 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4L4P0CJ87 422 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4L5P0CJ88 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4L6P0CJ89 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4L7P0CJ90 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MYBL2P10244 700 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ATP5JP18859 108 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SFSWAPQ12872 951 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 DNAJC3Q13217 504 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SPDYE2Q495Y8 402 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 FUKQ8N0W3 1084 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 C3orf20Q8ND61 904 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 CCNYQ8ND76 341 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ZNF507Q8TCN5 953 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 THAP9Q9H5L6 903 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MRPL40Q9NQ50 206 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DUX4Q9UBX2 424 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 RPAP1Q9BWH6 1393 aaPredicted RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 ZNF532Q9HCE3 1301 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MROH1Q8NDA8 1641 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SYNJ2BP-COX16A0A087WUM0 186 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ZNF839A8K0R7 811 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 KCNJ6P48051 423 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ARL4CP56559 192 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DCTN2Q13561 401 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 OASLQ15646 514 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 IFNEQ86WN2 208 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 EGFL6Q8IUX8 553 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 FMR1NBQ8N0W7 255 aaPredicted RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 EXT2Q93063 718 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SUCLG2Q96I99 432 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 KCNK16Q96T55 309 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SHCBP1LQ9BZQ2 653 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 C6orf203Q9P0P8 240 aaPredicted RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 COX16Q9P0S2 106 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 TRIM33Q9UPN9 1127 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 R3HDM2Q9Y2K5 976 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 GLI2P10070 1586 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ATP4AP20648 1035 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 GSTT1P30711 240 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SOX11P35716 441 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MYL7Q01449 175 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MECOMQ03112 1051 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ITKQ08881 620 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SMAD1Q15797 465 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 KYNUQ16719 465 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 PPP1R36Q96LQ0 422 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 EHD4Q9H223 541 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 FAM96AQ9H5X1 160 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 RBM12Q9NTZ6 932 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 AP4S1Q9Y587 144 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SYNGAP1Q96PV0 1343 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 AIM2O14862 343 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 MAFGO15525 162 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SMARCA1P28370 1054 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 NUP107P57740 925 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ISLR2Q6UXK2 745 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 IFNL2Q8IZJ0 200 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SIX6OS1Q8N1H7 587 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 STKLD1Q8NE28 680 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 RASGRP4Q8TDF6 673 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 LARP4BQ92615 738 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 EZH1Q92800 747 aaPredicted RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 TMA16Q96EY4 203 aaKnown RBP9.1□□□□□ -0.95
LCA5-201ENST00000369846 C9orf72Q96LT7 481 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 TRIM51Q9BSJ1 452 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 TSSK1BQ9BXA7 367 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 GALNT8Q9NY28 637 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 RWDD3Q9Y3V2 267 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ADCY9O60503 1353 aa9.1□□□□□ -0.95
LCA5-201ENST00000369846 ZC3H13Q5T200 1668 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 RGS5O15539 181 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 TPST1O60507 370 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 RUNX1T1Q06455 604 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 CAPRIN1Q14444 709 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 P3H1Q32P28 736 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 CCDC137Q6PK04 289 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 RAD9BQ6WBX8 426 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 BNIPLQ7Z465 357 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 NOP9Q86U38 636 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 ZBED8Q8IZ13 594 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 SKA2Q8WVK7 121 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 MTERF3Q96E29 417 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 NT5C1BQ96P26 610 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 MRPS26Q9BYN8 205 aaKnown RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 DSEQ9UL01 958 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 LRCH1Q9Y2L9 728 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 GRM1Q13255 1194 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 TSTA3Q13630 321 aaPredicted RBP9.09□□□□□ -0.95
LCA5-201ENST00000369846 SLC9A5Q14940 896 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 AGBL2Q5U5Z8 902 aa9.09□□□□□ -0.95
LCA5-201ENST00000369846 SNX30Q5VWJ9 437 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms