RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
CHD1L-203ENST00000369259 HSPA6P17066 643 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 POLGP54098 1239 aaPredicted RBP17.41■□□□□ 0.38
CHD1L-203ENST00000369259 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 UCMAQ8WVF2 138 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 TBC1D10AQ9BXI6 508 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 PITPNM3Q9BZ71 974 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 DCLRE1BQ9H816 532 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 IL17RBQ9NRM6 502 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 RPL26L1Q9UNX3 145 aaKnown RBP17.41■□□□□ 0.38
CHD1L-203ENST00000369259 LRCH1Q9Y2L9 728 aa17.41■□□□□ 0.38
CHD1L-203ENST00000369259 TMEM253P0C7T8 217 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 BRAFP15056 766 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 RXRBP28702 533 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 JAM2P57087 298 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 TFAP4Q01664 338 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 ZNF568Q3ZCX4 644 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 ARHGEF18Q6ZSZ5 1173 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 CCDC25Q86WR0 208 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 PRELID2Q8N945 189 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 ALG3Q92685 438 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 LMCD1Q9NZU5 365 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 USP20Q9Y2K6 914 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 GFPT2O94808 682 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 ALAS1P13196 640 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 RASA1P20936 1047 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 YARSP54577 528 aaKnown RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 EDRF1Q3B7T1 1238 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 FOXB2Q5VYV0 432 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 SDCCAG8Q86SQ7 713 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 PHC3Q8NDX5 983 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 SLC30A5Q8TAD4 765 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 SCFD1Q8WVM8 642 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 NMRK1Q9NWW6 199 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 CHCHD3Q9NX63 227 aaKnown RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 STOML1Q9UBI4 398 aa17.4■□□□□ 0.38
CHD1L-203ENST00000369259 COL1A1P02452 1464 aaPredicted RBP17.4■□□□□ 0.38
CHD1L-203ENST00000369259 STARD3NLO95772 234 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 TAC1P20366 129 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 VHLP40337 213 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 TTC27Q6P3X3 843 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 FRMD5Q7Z6J6 570 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 ATL2Q8NHH9 583 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 CFAP61Q8NHU2 1237 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 ZNF384Q8TF68 577 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 MAIP1Q8WWC4 291 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 CTNNBL1Q8WYA6 563 aaPredicted RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 SLC7A6OSQ96CW6 309 aaPredicted RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 LRRC37BQ96QE4 947 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 PAIP2Q9BPZ3 127 aaKnown RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 KIAA1683Q9H0B3 1180 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 CDC42EP4Q9H3Q1 356 aaKnown RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 DENND2DQ9H6A0 471 aaPredicted RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 AJAP1Q9UKB5 411 aaPredicted RBP17.39■□□□□ 0.38
CHD1L-203ENST00000369259 CHKBQ9Y259 395 aa17.39■□□□□ 0.38
CHD1L-203ENST00000369259 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 COL18A1P39060 1754 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 SIGLEC16A6NMB1 481 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 ENTPD5O75356 428 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 CTNNA2P26232 953 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 EPHB2P29323 1055 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 RASSF2P50749 326 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 STRN3Q13033 797 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 CCDC137Q6PK04 289 aaKnown RBP17.39■□□□□ 0.37
CHD1L-203ENST00000369259 CYFIP1Q7L576 1253 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 CCDC65Q8IXS2 484 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 CRNKL1Q9BZJ0 848 aaKnown RBP17.39■□□□□ 0.37
CHD1L-203ENST00000369259 EMILIN3Q9NT22 766 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 NKIRAS1Q9NYS0 192 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 TMOD4Q9NZQ9 345 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-203ENST00000369259 USH1CQ9Y6N9 552 aa17.39■□□□□ 0.37
CHD1L-203ENST00000369259 ZNF804BA4D1E1 1349 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 PDLIM1O00151 329 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 MAPK13O15264 365 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 ACSL3O95573 720 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 TTLL1O95922 423 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 NR2F2P24468 414 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 ECM1Q16610 540 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 AADACL2Q6P093 401 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 LRRC8CQ8TDW0 803 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 SIX2Q9NPC8 291 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-203ENST00000369259 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-203ENST00000369259 POTEFA5A3E0 1075 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 PALM3A6NDB9 673 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-203ENST00000369259 FOXO6A8MYZ6 492 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
CHD1L-203ENST00000369259 ECE2O60344 883 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms