RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 PANX2Q96RD6 677 aa16.58■□□□□ 0.24
SEMA6C-202ENST00000368912 CTNND2Q9UQB3 1225 aa16.58■□□□□ 0.24
SEMA6C-202ENST00000368912 CTTNQ14247 550 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 ANO7Q6IWH7 933 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 GDAQ9Y2T3 454 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 CTNND1O60716 968 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 BMP15O95972 392 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 CLCN2P51788 898 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 KCNJ2P63252 427 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 IL17AQ16552 155 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 MUM1Q2TAK8 710 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 NR1H4Q96RI1 486 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 NUDT12Q9BQG2 462 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 RNF146Q9NTX7 359 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 INTUQ9ULD6 942 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 SMIM23A6NLE4 172 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 A8MUI8 341 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 KRT38O76015 456 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 PTPRAP18433 802 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 ALDH5A1P51649 535 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 SCYL3Q8IZE3 742 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 SLX1AQ9BQ83 275 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 NAA15Q9BXJ9 866 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 RABL2BQ9UNT1 228 aa16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
SEMA6C-202ENST00000368912 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 POTECB2RU33 542 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 E9PMD0 336 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 GSTT1P30711 240 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 RAD23BP54727 409 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 PDE4DQ08499 809 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 BAATQ14032 418 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 HLTFQ14527 1009 aaKnown RBP eCLIP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 P3H4Q92791 437 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 TEPSINQ96N21 525 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 CORO1BQ9BR76 489 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 CFAP73A6NFT4 308 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 NDUFB5O43674 189 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 GBP1P32455 592 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 DNA2P51530 1060 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 SLC44A4Q53GD3 710 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 SH2D4BQ5SQS7 431 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 ZNF280DQ6N043 979 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 HIC2Q96JB3 615 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 MMRN2Q9H8L6 949 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 STIM2Q9P246 746 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 TEX33O43247 280 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 TBX2Q13207 712 aaPredicted RBP16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 EMBQ6PCB8 327 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 PAGE5Q96GU1 130 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 RIC8AQ9NPQ8 531 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 TFR2Q9UP52 801 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 TMEM98Q9Y2Y6 226 aa16.56■□□□□ 0.24
SEMA6C-202ENST00000368912 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 NPHP3-ACAD11A0A0J9YXS1 232 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 POTEFA5A3E0 1075 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 GAS7O60861 476 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 MYZAPP0CAP1 466 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 SP100P23497 879 aaPredicted RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 POTEEQ6S8J3 1075 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 CARD9Q9H257 536 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 UTP6Q9NYH9 597 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 CCDC88AQ3V6T2 1871 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 H0Y3Z8 333 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 BACE1P56817 501 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 ZNF280AP59817 542 aaPredicted RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 IGBP1P78318 339 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 IFI16Q16666 785 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 PPP4R3AQ6IN85 833 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 RMDN3Q96TC7 470 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 HSD3B7Q9H2F3 369 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 EMILIN3Q9NT22 766 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 SAMD15Q9P1V8 674 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 WDR37Q9Y2I8 494 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 RIPK3Q9Y572 518 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 MACROD2A1Z1Q3 448 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 CELF2O95319 508 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 CCT6BQ92526 530 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 SH3GLB2Q9NR46 395 aa16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-202ENST00000368912 EXOC1Q9NV70 894 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms