RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ASIC4Q96FT7 647 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
SNX27-202ENST00000368841 ZFP69BQ9UJL9 534 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 PAPOLAP51003 745 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 UPF3AQ9H1J1 476 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 GYG2O15488 501 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 PSMC1P62191 440 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 NDUFAF2Q8N183 169 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 TRIM55Q9BYV6 548 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 MAPK6Q16659 721 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 CCHCR1Q8TD31 782 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 GRIK1P39086 918 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 COBLL1Q53SF7 1204 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 SLC26A7Q8TE54 656 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 USP33Q8TEY7 942 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 RAD54LQ92698 747 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 DHX35Q9H5Z1 703 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 C1orf146Q5VVC0 180 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 B4GALNT2Q8NHY0 566 aa19.35■□□□□ 0.69
SNX27-202ENST00000368841 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.35■□□□□ 0.69
SNX27-202ENST00000368841 IKBKBO14920 756 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 PTK2BQ14289 1009 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 SLC10A5Q5PT55 438 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 CEP95Q96GE4 821 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 DACH2Q96NX9 599 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 INSRP06213 1382 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 GOLGA8RI6L899 631 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 AP1ARQ63HQ0 302 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 ZNF564Q8TBZ8 553 aaPredicted RBP19.34■□□□□ 0.69
SNX27-202ENST00000368841 ASNSD1Q9NWL6 643 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 RNF181Q9P0P0 153 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 PPARGP37231 505 aaPredicted RBP19.34■□□□□ 0.69
SNX27-202ENST00000368841 HSP90AA5PQ58FG0 334 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 RESP18Q5W5W9 173 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 PPHLN1Q8NEY8 458 aaKnown RBP19.34■□□□□ 0.69
SNX27-202ENST00000368841 MFAP3LO75121 409 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 SLFN12LQ6IEE8 588 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 MASTLQ96GX5 879 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 PALLDQ8WX93 1383 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 FAM180AQ6UWF9 173 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 HPS3Q969F9 1004 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
SNX27-202ENST00000368841 GGCXP38435 758 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 ARL4CP56559 192 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 ADGRF4Q8IZF3 695 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 ING2Q9H160 280 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.69
SNX27-202ENST00000368841 ZNF772Q68DY9 489 aaPredicted RBP19.33■□□□□ 0.69
SNX27-202ENST00000368841 ZBED8Q8IZ13 594 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 BEST2Q8NFU1 509 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 PNMA3Q9UL41 463 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 SCINQ9Y6U3 715 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 CTSHP09668 335 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 PHKA2P46019 1235 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 C6orf118Q5T5N4 469 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 RMDN1Q96DB5 314 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 KIF12Q96FN5 646 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.69
SNX27-202ENST00000368841 METP08581 1390 aa19.33■□□□□ 0.69
SNX27-202ENST00000368841 MAGOHP61326 146 aaKnown RBP19.33■□□□□ 0.68
SNX27-202ENST00000368841 SURF1Q15526 300 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 C16orf87Q6PH81 154 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 TTC8Q8TAM2 541 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 JAK3P52333 1124 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 TMEM179Q6ZVK1 233 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 ACAD11Q709F0 780 aa19.33■□□□□ 0.68
SNX27-202ENST00000368841 VAMP7P51809 220 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 PDIA2Q13087 525 aaKnown RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 LRRC31Q6UY01 552 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 TMC4Q7Z404 712 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 AGAP3Q96P47 875 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 FAM167BQ9BTA0 163 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 FASTKD1Q53R41 847 aaKnown RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 TMEM47Q9BQJ4 181 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 INTS2Q9H0H0 1204 aaKnown RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 ZBTB5O15062 677 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 ASMTLO95671 621 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 TRIM49P0CI25 452 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 TRIM49CP0CI26 452 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 FGFR4P22455 802 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 SPARCL1Q14515 664 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 LRRC8EQ6NSJ5 796 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 OR6P1Q8NGX9 317 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 ABHD10Q9NUJ1 306 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 A8MXQ7 604 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 GPSM2P81274 684 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 ADCY2Q08462 1091 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 FAM102AQ5T9C2 384 aaPredicted RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 CNOT10Q9H9A5 744 aaKnown RBP19.32■□□□□ 0.68
SNX27-202ENST00000368841 DCAF4Q8WV16 495 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
SNX27-202ENST00000368841 ROR1Q01973 937 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 KCNH2Q12809 1159 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
SNX27-202ENST00000368841 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms