RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 MCM3APO60318 1980 aa28.89■■■□□ 2.21
EFNA1-202ENST00000368407 SNAI1O95863 264 aaPredicted RBP28.88■■■□□ 2.21
EFNA1-202ENST00000368407 ITGB3BPQ13352 177 aaPredicted RBP28.88■■■□□ 2.21
EFNA1-202ENST00000368407 GNPTABQ3T906 1256 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 MMS22LQ6ZRQ5 1243 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 B4GALNT4Q76KP1 1039 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 SLFN12Q8IYM2 578 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 BAP1Q92560 729 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 NOX5Q96PH1 765 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.88■■■□□ 2.21
EFNA1-202ENST00000368407 PCDHA12Q9UN75 941 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 AKR1B10O60218 316 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 MOCS3O95396 460 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 C8orf74Q6P047 294 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 PDXDC1Q6P996 788 aa28.88■■■□□ 2.21
EFNA1-202ENST00000368407 SPATA31C2B4DYI2 1134 aa28.87■■■□□ 2.21
EFNA1-202ENST00000368407 MAGEA1P43355 309 aa28.87■■■□□ 2.21
EFNA1-202ENST00000368407 CFAP221Q4G0U5 840 aa28.87■■■□□ 2.21
EFNA1-202ENST00000368407 MLXIPQ9HAP2 919 aa28.87■■■□□ 2.21
EFNA1-202ENST00000368407 CENPFP49454 3210 aa28.87■■■□□ 2.21
EFNA1-202ENST00000368407 POTEMA6NI47 508 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 PSMD10O75832 226 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 FXR2P51116 673 aaKnown RBP eCLIP28.86■■■□□ 2.21
EFNA1-202ENST00000368407 GNGT1P63211 74 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 LRCH2Q5VUJ6 765 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 SV2BQ7L1I2 683 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 BCAS4Q8TDM0 211 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 BCAS3Q9H6U6 928 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 PDGFCQ9NRA1 345 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 FAM169AQ9Y6X4 670 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 HTTP42858 3142 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 GUCY2CP25092 1073 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 CCT5P48643 541 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 SP2Q02086 613 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 PAK2Q13177 524 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 SWT1Q5T5J6 900 aaKnown RBP28.86■■■□□ 2.21
EFNA1-202ENST00000368407 GDAP1L1Q96MZ0 367 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 MMTAG2Q9BU76 263 aaKnown RBP28.86■■■□□ 2.21
EFNA1-202ENST00000368407 TLR10Q9BXR5 811 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 KATNBL1Q9H079 304 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 VAV3Q9UKW4 847 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 MYH10P35580 1976 aa28.86■■■□□ 2.21
EFNA1-202ENST00000368407 SYNGAP1Q96PV0 1343 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 CES2O00748 559 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 MAFGO15525 162 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 DHX15O43143 795 aaKnown RBP28.85■■■□□ 2.21
EFNA1-202ENST00000368407 PLEKP08567 350 aaPredicted RBP28.85■■■□□ 2.21
EFNA1-202ENST00000368407 ICAM3P32942 547 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 SPIRE1Q08AE8 756 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 KDM7AQ6ZMT4 941 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 HDAC7Q8WUI4 952 aa28.85■■■□□ 2.21
EFNA1-202ENST00000368407 DDX39AO00148 427 aaKnown RBP28.84■■■□□ 2.21
EFNA1-202ENST00000368407 KCNA2P16389 499 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 TMEM266Q2M3C6 531 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 KLHDC7AQ5VTJ3 777 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 NFRKBQ6P4R8 1299 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 CDHR1Q96JP9 859 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 SRRDQ9UH36 339 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 GGA2Q9UJY4 613 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 GAS7O60861 476 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 ERLIN2O94905 339 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 ARIH2O95376 493 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 XRCC5P13010 732 aaKnown RBP28.84■■■□□ 2.21
EFNA1-202ENST00000368407 GTF2A1P52655 376 aaPredicted RBP28.84■■■□□ 2.21
EFNA1-202ENST00000368407 OLFML2BQ68BL8 750 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 IQCKQ8N0W5 287 aa28.84■■■□□ 2.21
EFNA1-202ENST00000368407 LRRC53A6NM62 1247 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 SORBS3O60504 671 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 IGHA2P01877 340 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 EHHADHQ08426 723 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 TTMPQ5BVD1 217 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 TMEM63BQ5T3F8 832 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 TAPT1Q6NXT6 567 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 LRRC55Q6ZSA7 311 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 OTOP1Q7RTM1 612 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 CEP89Q96ST8 783 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 RIT2Q99578 217 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 CEP72Q9P209 647 aa28.83■■■□□ 2.21
EFNA1-202ENST00000368407 USP8P40818 1118 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 PRAMEF19Q5SWL8 479 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 YTHDF3Q7Z739 585 aaKnown RBP28.82■■■□□ 2.2
EFNA1-202ENST00000368407 TSEN2Q8NCE0 465 aaKnown RBP28.82■■■□□ 2.2
EFNA1-202ENST00000368407 WHAMMQ8TF30 809 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 PLIN2Q99541 437 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 TSG101Q99816 390 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 VTA1Q9NP79 307 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 LY6KQ17RY6 165 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 TRIB2Q92519 343 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 TEKT3Q9BXF9 490 aa28.82■■■□□ 2.2
EFNA1-202ENST00000368407 ATP8B3O60423 1300 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 KIAA1217Q5T5P2 1943 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 EPHB6O15197 1021 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 CHMP2AO43633 222 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 UBA1P22314 1058 aaKnown RBP28.81■■■□□ 2.2
EFNA1-202ENST00000368407 ACVR2BQ13705 512 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 PDIA5Q14554 519 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 HGSNATQ68CP4 663 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 UNC45AQ9H3U1 944 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 ABHD16BQ9H3Z7 469 aa28.81■■■□□ 2.2
EFNA1-202ENST00000368407 PLEKHA4Q9H4M7 779 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms