RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SPHKAPQ2M3C7 1700 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 DISP1Q96F81 1524 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PLS3P13797 630 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 HOXC8P31273 242 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PAK2Q13177 524 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 AMHR2Q16671 573 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ZNF667Q5HYK9 610 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 LRRC31Q6UY01 552 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PARK7Q99497 189 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 MYOZ2Q9NPC6 264 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SYCE1LA8MT33 242 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 GPC4O75487 556 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 USP6P35125 1406 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PMS1P54277 932 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 UBE3CQ15386 1083 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 BBOF1Q8ND07 529 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PPWD1Q96BP3 646 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TJP2Q9UDY2 1190 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TLK1Q9UKI8 766 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PQBP1O60828 265 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 MED21Q13503 144 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TMEM270Q6UE05 265 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ENOX1Q8TC92 643 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
SPTA1-201ENST00000368147 HASPINQ8TF76 798 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ACAD9Q9H845 621 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 PCSK1NQ9UHG2 260 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 FTCDO95954 541 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 ST8SIA6P61647 398 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TMEM143Q96AN5 459 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 TSC22D3Q99576 134 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 MFSD1Q9H3U5 465 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
SPTA1-201ENST00000368147 JAK3P52333 1124 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 GNASQ5JWF2 1037 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ZMYM1Q5SVZ6 1142 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ATAD3BQ5T9A4 648 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TTLL11Q8NHH1 800 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TUBGCP3Q96CW5 907 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 RMDN1Q96DB5 314 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 EMILIN3Q9NT22 766 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 CCDC195A0A1B0GUA6 201 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 A8MXQ7 604 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ZC3H12BQ5HYM0 836 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PLEKHM3Q6ZWE6 761 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PCGF5Q86SE9 256 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TSC1Q92574 1164 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TRAIPQ9BWF2 469 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 AP1M1Q9BXS5 423 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ACTR5Q9H9F9 607 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TOPORSQ9NS56 1045 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 INTUQ9ULD6 942 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ZNRF3Q9ULT6 936 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PCDHA7Q9UN72 937 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 SAR1BQ9Y6B6 198 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ZBED1O96006 694 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TNFAIP2Q03169 654 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ASPHQ12797 758 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM71Q2Q1W2 868 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 CLEC10AQ8IUN9 316 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PHF21AQ96BD5 680 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 THOC1Q96FV9 657 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PCDHB6Q9Y5E3 794 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 POTEFA5A3E0 1075 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 CYBBP04839 570 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 POTEIP0CG38 1075 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 RALAP11233 206 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 SLCO1A2P46721 670 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 BPIFB4P59827 614 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 BTBD8Q5XKL5 378 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 POTEGQ6S5H5 508 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 POTEEQ6S8J3 1075 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 EGFL8Q99944 293 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 HEMGNQ9BXL5 484 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 KLK14Q9P0G3 267 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 CPA4Q9UI42 421 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 ANGPTL2Q9UKU9 493 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 H3BRJ5 948 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 POLRMTO00411 1230 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 NDUFB5O43674 189 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 PFKFB2O60825 505 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 RBL2Q08999 1139 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 FSCBQ5H9T9 825 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 FAM180AQ6UWF9 173 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 LZICQ8WZA0 190 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
SPTA1-201ENST00000368147 FZD1Q9UP38 647 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 TMEM247A6NEH6 219 aa7.52□□□□□ -1.21
SPTA1-201ENST00000368147 RPS6KA5O75582 802 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms