RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CLIC6Q96NY7 704 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 PAPOLBQ9NRJ5 636 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 RBBP7Q16576 425 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.38e-7■■□□□ 12.8
TPR-201ENST00000367478 PLEKHA8Q96JA3 519 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 PRAMEP78395 509 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 MEI1Q5TIA1 1274 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 RMDN2Q96LZ7 410 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 UGGT2Q9NYU1 1516 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
TPR-201ENST00000367478 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 EGFL8Q99944 293 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
TPR-201ENST00000367478 PGM1P36871 562 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 SCRN1Q12765 414 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 CNGA2Q16280 664 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 VPS11Q9H270 941 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 HSPA9P38646 679 aaKnown RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 SETD3Q86TU7 594 aaPredicted RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 OSBPL9Q96SU4 736 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 TSPAN17Q96FV3 270 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 DDX50Q9BQ39 737 aaKnown RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 CHL1O00533 1208 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 KITP10721 976 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 TRIP13Q15645 432 aaPredicted RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 DPCR1Q3MIW9 517 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 AP4S1Q9Y587 144 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 PSMD3O43242 534 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 AIPL1Q9NZN9 384 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 IP6K2Q9UHH9 426 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 EIF2B5Q13144 721 aaKnown RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 PDCLQ13371 301 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.32e-11■■□□□ 12
TPR-201ENST00000367478 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
TPR-201ENST00000367478 KANSL2Q9H9L4 492 aa13.18□□□□□ -0.3
TPR-201ENST00000367478 NEMP1O14524 444 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 TMED8Q6PL24 325 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 CLEC4FQ8N1N0 589 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
TPR-201ENST00000367478 CASS4Q9NQ75 786 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 SH3GLB2Q9NR46 395 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 AURKCQ9UQB9 309 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 H7C0S8 307 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 FAM47EQ6ZV65 393 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 MRPL48Q96GC5 212 aaKnown RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 OSBPL10Q9BXB5 764 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 NCKAP1LP55160 1127 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 GTF2IP78347 998 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 RAD51Q06609 339 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 ORC2Q13416 577 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 CCNYL1Q8N7R7 359 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 MMP1P03956 469 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 JAK3P52333 1124 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 EME1Q96AY2 570 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 BRAFP15056 766 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 STAT4Q14765 748 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 STXBP2Q15833 593 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 MB21D1Q8N884 522 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 ATP6V1G3Q96LB4 118 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 KRCC1Q9NPI7 259 aaPredicted RBP13.17□□□□□ -0.3
TPR-201ENST00000367478 KDM5DQ9BY66 1539 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 NLRP14Q86W24 1093 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 DDIASQ8IXT1 998 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 ACRBPQ8NEB7 543 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 SIKE1Q9BRV8 207 aa13.17□□□□□ -0.3
TPR-201ENST00000367478 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms