RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 DNAJC6O75061 913 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TOM1L1O75674 476 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TRPA1O75762 1119 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ESRRBO95718 433 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 AGTP01019 485 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ABCE1P61221 599 aaKnown RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 STILQ15468 1287 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TBCCQ15814 346 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 DNAL1Q4LDG9 190 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 RINLQ6ZS11 566 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 FAM133AQ8N9E0 248 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ATP11CQ8NB49 1132 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 IL17REQ8NFR9 667 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 SH3TC2Q8TF17 1288 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ATP6V1G3Q96LB4 118 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 FRMD8Q9BZ67 464 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 WWP1Q9H0M0 922 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TAF1DQ9H5J8 278 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TMEM165Q9HC07 324 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 IP6K2Q9UHH9 426 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 GOLGA8IPA6NC78 632 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 STAT2P52630 851 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ERICH1Q86X53 443 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 AGGF1Q8N302 714 aaeCLIP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 CLMNQ96JQ2 1002 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 ASPSCR1Q9BZE9 553 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 UBE2TQ9NPD8 197 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 STX18Q9P2W9 335 aaKnown RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
SYNE1-209ENST00000367257 L3MBTL1Q9Y468 752 aa9.49□□□□□ -0.89
SYNE1-209ENST00000367257 TULP2O00295 520 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SUPT3HO75486 399 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 CDH2P19022 906 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 GGCXP38435 758 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 MRPS15P82914 257 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 NUGGCQ68CJ6 796 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 GUF1Q8N442 669 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 OLFML3Q9NRN5 406 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 PTPN22Q9Y2R2 807 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 TRIM67Q6ZTA4 783 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 CHMP6Q96FZ7 201 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 CNPY3Q9BT09 278 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 RPF1Q9H9Y2 349 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 EML4Q9HC35 981 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 ANLNQ9NQW6 1124 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 NSMCE4AQ9NXX6 385 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 C16orf96A6NNT2 1141 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 H0Y3Z8 333 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 EIF3HO15372 352 aaKnown RBP eCLIP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 KCNA3P22001 575 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 PMS2P54278 862 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 AGBL2Q5U5Z8 902 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 TRMT10CQ7L0Y3 403 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 EPM2AIP1Q7L775 607 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 GPKOWQ92917 476 aaPredicted RBP eCLIP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 AHCYL1O43865 530 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 EEF1B2P24534 225 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 MLH1P40692 756 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 COPS2P61201 443 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 KRT76Q01546 638 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 CYP4F22Q6NT55 531 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 CLEC4GQ6UXB4 293 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 RSRC2Q7L4I2 434 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 PRUNE1Q86TP1 453 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SNF8Q96H20 258 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 AP5M1Q9H0R1 490 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 MRPL46Q9H2W6 279 aaKnown RBP9.48□□□□□ -0.89
SYNE1-209ENST00000367257 PDP2Q9P2J9 529 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 TULP4Q9NRJ4 1543 aa9.48□□□□□ -0.89
SYNE1-209ENST00000367257 SOWAHDA6NJG2 315 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 APOA1P02647 267 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 PLCG1P19174 1290 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 TMPRSS15P98073 1019 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 MTHFD1LQ6UB35 978 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 STX19Q8N4C7 294 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 MAML3Q96JK9 1138 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 ANKRD27Q96NW4 1050 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 ACAP3Q96P50 834 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 KRT82Q9NSB4 513 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 CFAP69A5D8W1 941 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 ADCY3O60266 1144 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 HSPA13P48723 471 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 SERPINB9P50453 376 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 TRIM60Q495X7 471 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 TMEM179Q6ZVK1 233 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 FLCNQ8NFG4 579 aa9.47□□□□□ -0.89
SYNE1-209ENST00000367257 KRT35Q92764 455 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms