RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 UBE2SQ16763 222 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CAPRIN2Q6IMN6 1127 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 ATL2Q8NHH9 583 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SAYSD1Q9NPB0 183 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 PACSIN2Q9UNF0 486 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 FTLP02792 175 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SLC16A2P36021 539 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 VAMP7P51809 220 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 NPEPPSP55786 919 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 STK4Q13043 487 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 RCN2Q14257 317 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 CES2O00748 559 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 FSCBQ5H9T9 825 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 SERPINB4P48594 390 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 AP3M2P53677 418 aa12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 TBX2Q13207 712 aaPredicted RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYH9P35579 1960 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 BRAFP15056 766 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 YY1AP1Q9H869 796 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 ETNK1Q9HBU6 452 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 DCCP43146 1447 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 ASNSP08243 561 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 ATP6V0A4Q9HBG4 840 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 SLIT3O75094 1523 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 SRRM3A6NNA2 597 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 DNAJC8O75937 253 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 ITIH2P19823 946 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 FNTAP49354 379 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 PTGISQ16647 500 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 MAML1Q92585 1016 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 IP6K2Q9UHH9 426 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 TRIM66O15016 1216 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 TAF6LQ9Y6J9 622 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 RPS6KA4O75676 772 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 TRIM33Q9UPN9 1127 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 MYH13Q9UKX3 1938 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 KDM6AO15550 1401 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 DARS2Q6PI48 645 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 TEX9Q8N6V9 391 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 PP2D1A8MPX8 630 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 FDX1P10109 184 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 FMO5P49326 533 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 TRPM8Q7Z2W7 1104 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 FAM167AQ96KS9 214 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 AMACRQ9UHK6 382 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 GTPBP10A4D1E9 387 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 FBXL13Q8NEE6 735 aa12.59□□□□□ -0.39
CDC42BPA-202ENST00000366764 STXBP3O00186 592 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 ERP44Q9BS26 406 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 COPEO14579 308 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZBED1O96006 694 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 NTRK3Q16288 839 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 PIP4K2CQ8TBX8 421 aa12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.39
CDC42BPA-202ENST00000366764 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 NUDCD1Q96RS6 583 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 CCDC22O60826 627 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 GSTA1P08263 222 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 KRT3P12035 628 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 AP2B1P63010 937 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 RASSF10A6NK89 507 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 SPAG6O75602 509 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 PSMA2P25787 234 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 ITIH4Q14624 930 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 STK32BQ9NY57 414 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 BBS9Q3SYG4 887 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 SLC5A4Q9NY91 659 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 MMEL1Q495T6 779 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 TTI2Q6NXR4 508 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CDC42BPA-202ENST00000366764 TTC4O95801 387 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms