RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 UBALD2Q8IYN6 164 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 HELQQ8TDG4 1101 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 UNC45AQ9H3U1 944 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 RNF19AQ9NV58 838 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 PCDHA4Q9UN74 947 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 SNX14Q9Y5W7 946 aa13.92□□□□□ -0.18
MRPL55-209ENST00000366735 HIDE1A8MVS5 230 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
MRPL55-209ENST00000366735 PBX3P40426 434 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
MRPL55-209ENST00000366735 NTRK3Q16288 839 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 CLLU1OSQ5K130 101 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 LRRC55Q6ZSA7 311 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 PRSS33Q8NF86 280 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 TBCKQ8TEA7 893 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 NIFKQ9BYG3 293 aaKnown RBP13.91□□□□□ -0.18
MRPL55-209ENST00000366735 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 S1PR5Q9H228 398 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 PIN4Q9Y237 131 aaKnown RBP13.91□□□□□ -0.18
MRPL55-209ENST00000366735 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
MRPL55-209ENST00000366735 MTCL1Q9Y4B5 1905 aaKnown RBP13.91□□□□□ -0.18
MRPL55-209ENST00000366735 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 PSMD10O75832 226 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 DEXIO95424 95 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 MLLT3P42568 568 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 PHKA2P46019 1235 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 BCAR1P56945 870 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 UGCGQ16739 394 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 SYCE2Q6PIF2 218 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 MRPL43Q8N983 215 aaKnown RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 PGBD4Q96DM1 585 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 ZNF668Q96K58 619 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-209ENST00000366735 APOL5Q9BWW9 433 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 ADAM7Q9H2U9 754 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 SORCS3Q9UPU3 1222 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
MRPL55-209ENST00000366735 ZDBF2Q9HCK1 2354 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 ST18O60284 1047 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 FGFR4P22455 802 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 EVCP57679 992 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 PSMC5P62195 406 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 NONOQ15233 471 aaKnown RBP eCLIP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 CATSPER4Q7RTX7 472 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 RHPN2Q8IUC4 686 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 BLIDQ8IZY5 108 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 TDRD5Q8NAT2 981 aaKnown RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 DAGLBQ8NCG7 672 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 SLC7A3Q8WY07 619 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 ASIC4Q96FT7 647 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 NAP1L4Q99733 375 aaKnown RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 FAM105AQ9NUU6 356 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 SUCLA2Q9P2R7 463 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 DDX25Q9UHL0 483 aaKnown RBP13.89□□□□□ -0.19
MRPL55-209ENST00000366735 PLXNA3P51805 1871 aa13.89□□□□□ -0.19
MRPL55-209ENST00000366735 CYP3A7-CYP3A51PA0A087WV96 503 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 A0A087WZ62 844 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 IGKV6-21A0A0C4DH24 114 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 ADAMTS3O15072 1205 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CLASP2O75122 1294 aaKnown RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CDKL5O76039 1030 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CXCL14O95715 111 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 XBP1P17861 261 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CYP3A7P24462 503 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 MCM2P49736 904 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 NOMO2Q5JPE7 1267 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 RUFY3Q7L099 469 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 DDX53Q86TM3 631 aaKnown RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 KREMEN2Q8NCW0 462 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 FAM193BQ96PV7 902 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 FDXACB1Q9BRP7 624 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 POMKQ9H5K3 350 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
MRPL55-209ENST00000366735 IRAK3Q9Y616 596 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CYP46A1Q9Y6A2 500 aa13.88□□□□□ -0.19
MRPL55-209ENST00000366735 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms