RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 MYCT1Q8N699 235 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 TMEM40Q8WWA1 233 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 BSNDQ8WZ55 320 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 GDF15Q99988 308 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 KMT5AQ9NQR1 393 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 PADI3Q9ULW8 664 aa15.26■□□□□ 0.03
NSMCE1-201ENST00000361439 LTBP2Q14767 1821 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 ABHD14A-ACY1A0A1B0GW23 586 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 CCDC169A6NNP5 214 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 TRAK2O60296 914 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 LIG1P18858 919 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 AFMP43652 599 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 NCKAP1LP55160 1127 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 ASIC1P78348 528 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 MBTD1Q05BQ5 628 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 ALCAMQ13740 583 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 MAPK6Q16659 721 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 FAM228AQ86W67 206 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 FAM178BQ8IXR5 827 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 GTPBP4Q9BZE4 634 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 MTIF3Q9H2K0 278 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 FZD8Q9H461 694 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 ERVK-5Q9HDB9 667 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 PANK4Q9NVE7 773 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 PRMT7Q9NVM4 692 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 NOC2LQ9Y3T9 749 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-201ENST00000361439 TNRC18O15417 2968 aaPredicted RBP15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 SFI1A8K8P3 1242 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 K7ERI5 159 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 FGBP02675 491 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 IDEP14735 1019 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 CD52P31358 61 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 EHHADHQ08426 723 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 PSMD2Q13200 908 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 CUL4BQ13620 913 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 IKBKEQ14164 716 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 POSTNQ15063 836 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 HERC4Q5GLZ8 1057 aaPredicted RBP15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 DEFB128Q7Z7B8 93 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 TMEM161BQ8NDZ6 487 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 DBF4BQ8NFT6 615 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 STAMQ92783 540 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 CCDC47Q96A33 483 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 HVCN1Q96D96 273 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 CCDC51Q96ER9 411 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 PPP1R16BQ96T49 567 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 TRAIPQ9BWF2 469 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 AGO3Q9H9G7 860 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
NSMCE1-201ENST00000361439 INO80B-WBP1J3KQ70 363 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 ACKR2O00590 384 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 ERLIN2O94905 339 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 SMC2O95347 1197 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 MBD3O95983 291 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 ZSCAN20P17040 1043 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 MCM4P33991 863 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 GTF2BQ00403 316 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 DPYDQ12882 1025 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 COASYQ13057 564 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 TMEM240Q5SV17 173 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 C16orf59Q7L2K0 433 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 CATSPER4Q7RTX7 472 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 ZNF720Q7Z2F6 126 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 HERVK_113Q902F9 699 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 GSDMAQ96QA5 445 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 ZHX3Q9H4I2 956 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 POLD4Q9HCU8 107 aa15.23■□□□□ 0.03
NSMCE1-201ENST00000361439 SLC16A4O15374 487 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 NFX1Q12986 1120 aaKnown RBP15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 STRN3Q13033 797 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 KCNB1Q14721 858 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 SFR1Q86XK3 245 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 ZNF668Q96K58 619 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 STRA6Q9BX79 667 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 BLZF1Q9H2G9 400 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 MRPL44Q9H9J2 332 aaKnown RBP15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 C1orf112Q9NSG2 853 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 AGPAT5Q9NUQ2 364 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
NSMCE1-201ENST00000361439 ADGRA3Q8IWK6 1321 aa15.21■□□□□ 0.03
NSMCE1-201ENST00000361439 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
NSMCE1-201ENST00000361439 DENND3A2RUS2 1198 aa15.21■□□□□ 0.03
NSMCE1-201ENST00000361439 K7ENM7 598 aa15.21■□□□□ 0.03
NSMCE1-201ENST00000361439 EIF3DO15371 548 aaKnown RBP eCLIP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms