RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 ADAMTS2O95450 1211 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 CCDC144BQ3MJ40 725 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 USP39Q53GS9 565 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 TTC23LQ6PF05 361 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 SLC7A3Q8WY07 619 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 SLC10A5Q5PT55 438 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 ARMT1Q9H993 441 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 SNX14Q9Y5W7 946 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 MIF4GDA9UHW6 222 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 MEI1Q5TIA1 1274 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 SH3KBP1Q96B97 665 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 XPO1O14980 1071 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 MFN2O95140 757 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 ALBP02768 609 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 SFR1Q86XK3 245 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 VPS11Q9H270 941 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 MRPL11Q9Y3B7 192 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 RTCBQ9Y3I0 505 aaKnown RBP8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 CITO14578 2027 aa8.9□□□□□ -0.98
NCKAP1-202ENST00000361354 GFPT2O94808 682 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 SERPINH1P50454 418 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 PLOD1Q02809 727 aaPredicted RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 SNRNP27Q8WVK2 155 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 RPS6P62753 249 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 ACCSQ96QU6 501 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 AP1M1Q9BXS5 423 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 EIF2B2P49770 351 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 FKBP3Q00688 224 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 PLCH2O75038 1416 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 CENPXA8MT69 81 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 RBL2Q08999 1139 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 TRIQKQ629K1 86 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 ANKRD13CQ8N6S4 541 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 ZNF532Q9HCE3 1301 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 SOWAHDA6NJG2 315 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 NDUFA10O95299 355 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 MAPKAPK2P49137 400 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 SETD3Q86TU7 594 aaPredicted RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 MRPL50Q8N5N7 158 aaKnown RBP8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 CLMNQ96JQ2 1002 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 ADGRA3Q8IWK6 1321 aa8.9□□□□□ -0.99
NCKAP1-202ENST00000361354 ALDH18A1P54886 795 aaKnown RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TAF8Q7Z7C8 310 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 THAP9Q9H5L6 903 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 FLT3P36888 993 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TCIRG1Q13488 830 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 SURF1Q15526 300 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 NAALADL2Q58DX5 795 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 C6orf10Q5SRN2 563 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 CALML6Q8TD86 181 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 AKT3Q9Y243 479 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ZMYM4Q5VZL5 1548 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 SNAPC4Q5SXM2 1469 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 DPP10Q8N608 796 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 APOL4Q9BPW4 351 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 COPB2P35606 906 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 PSD3Q9NYI0 1048 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 PCDHA13Q9Y5I0 950 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 SUPT3HB4E1H0 165 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ZNF18P17022 549 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 KIAA1841Q6NSI8 718 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TMA16Q96EY4 203 aaKnown RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 UBA2Q9UBT2 640 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 CALB1P05937 261 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 POU5F1BQ06416 359 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 KRT31Q15323 416 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 CNBD1Q8NA66 436 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 UBE2TQ9NPD8 197 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 INTS13Q9NVM9 706 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 IPPQ9Y573 584 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 GRID2IPA4D2P6 1211 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 GUCY1B2O75343 617 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 THEMIS2Q5TEJ8 643 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 SNF8Q96H20 258 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 KDSRQ06136 332 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ATP6V1G3Q96LB4 118 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 MYL10Q9BUA6 226 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 CDYLQ9Y232 598 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 SGSM2O43147 1006 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ENO1P06733 434 aaKnown RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TRIP10Q15642 601 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ZNF654Q8IZM8 581 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 PI4K2BQ8TCG2 481 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 GGA1Q9UJY5 639 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 ASXL3Q9C0F0 2248 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 CUL4AQ13619 759 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TBC1D22AQ8WUA7 517 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 RWDD2AQ9UIY3 292 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 LRRC53A6NM62 1247 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 WASLO00401 505 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 KLHL17Q6TDP4 642 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
NCKAP1-202ENST00000361354 EIF4A3P38919 411 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms