RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TAF5LO75529 589 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 DLGAP5Q15398 846 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 LARGE2Q8N3Y3 721 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 OSBPL10Q9BXB5 764 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF518AQ6AHZ1 1483 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 TRIM13O60858 407 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 LVRNQ6Q4G3 990 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 SNAP25P60880 206 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF408Q9H9D4 720 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ALAS1P13196 640 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CCND1P24385 295 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ERICH1Q86X53 443 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 VPS11Q9H270 941 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 KRCC1Q9NPI7 259 aaPredicted RBP9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CEP72Q9P209 647 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ANAPC7Q9UJX3 599 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CYP4A11Q02928 519 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 CDO1Q16878 200 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 BBS2Q9BXC9 721 aa9.86□□□□□ -0.83
VPS13A-203ENST00000360280 H2AFY2Q9P0M6 372 aaPredicted RBP9.86□□□□□ -0.83
VPS13A-203ENST00000360280 ELMOD1Q8N336 334 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ABHD10Q9NUJ1 306 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 INO80B-WBP1J3KQ70 363 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ZAP70P43403 619 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 CCNYL1Q8N7R7 359 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 C7orf31Q8N865 590 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 INO80BQ9C086 356 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 BRAFP15056 766 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 KPNB1Q14974 876 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ARMCX4Q5H9R4 360 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 IFNL3Q8IZI9 196 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 TNRQ92752 1358 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 SEMA3EO15041 775 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 FAM107AO95990 144 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 KRT31Q15323 416 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 HEATR6Q6AI08 1181 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 LRRC47Q8N1G4 583 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 TRIM62Q9BVG3 475 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 SCN3BQ9NY72 215 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 AIPL1Q9NZN9 384 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 MYOM2P54296 1465 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 A0A1W2PP64 1363 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 LRRIQ3A6PVS8 624 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 MMP1P03956 469 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 CTSWP56202 376 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ACTN3Q08043 901 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 RTL3Q8N8U3 475 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 IQCA1LA6NCM1 817 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ALKBH5Q6P6C2 394 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 CCDC149Q6ZUS6 474 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 CASP10Q92851 521 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ANO9A1A5B4 782 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 MFAP3LO75121 409 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 TTLL1O95922 423 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 SLFN12LQ6IEE8 588 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ABCC2Q92887 1545 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 MEFVO15553 781 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 DSG1Q02413 1049 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 PCDHA5Q9Y5H7 936 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 TFDP2Q14188 446 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 FANCEQ9HB96 536 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 MTMR6Q9Y217 621 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 TEX14Q8IWB6 1497 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 OR6B2Q6IFH4 312 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 SMYD4Q8IYR2 804 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 OLFM1Q99784 485 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 RNF103O00237 685 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ROR1Q01973 937 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 NDUFA5Q16718 116 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 DDX56Q9NY93 547 aaKnown RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 IL1RAPL1Q9NZN1 696 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 PALMO75781 387 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 PCYOX1LQ8NBM8 494 aa9.85□□□□□ -0.83
VPS13A-203ENST00000360280 ZNF594Q96JF6 807 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-203ENST00000360280 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.831e-6■□□□□ 10.8
VPS13A-203ENST00000360280 DYTNA2CJ06 578 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 CMTR1Q8N1G2 835 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 CLIC6Q96NY7 704 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 DDHD1Q8NEL9 900 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 CCNA1P78396 465 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 GPS1Q13098 491 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 THOC1Q96FV9 657 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 ASNSD1Q9NWL6 643 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 SPATA21Q7Z572 469 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 NUP107P57740 925 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 MAN1B1Q9UKM7 699 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 NEMP1O14524 444 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 SCRN1Q12765 414 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 KCNK16Q96T55 309 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 RPF1Q9H9Y2 349 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 VPS50Q96JG6 964 aa9.84□□□□□ -0.83
VPS13A-203ENST00000360280 PRMT1Q99873 361 aaKnown RBP9.84□□□□□ -0.83
VPS13A-203ENST00000360280 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms