RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ABCB11O95342 1321 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 PYGMP11217 842 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 SLC1A1P43005 524 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 TBK1Q9UHD2 729 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 GYG2O15488 501 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 HSPA4LO95757 839 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ADRA2BP18089 450 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ZKSCAN8Q15776 578 aaPredicted RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 DIAPH2O60879 1101 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 IFNAR1P17181 557 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 PRKCQQ04759 706 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 RBL2Q08999 1139 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ANO5Q75V66 913 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 DACH2Q96NX9 599 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 BPIFA3Q9BQP9 254 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ADAM22Q9P0K1 906 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 BLOC1S6Q9UL45 172 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ADGRL2O95490 1459 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 NDUFA10O95299 355 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 SERPINB4P48594 390 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 UNC13DQ70J99 1090 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 NLRP10Q86W26 655 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 UHMK1Q8TAS1 419 aaKnown RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 ANLNQ9NQW6 1124 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 MMP1P03956 469 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 BANK1Q8NDB2 785 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 MMP19Q99542 508 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 NSMCE4AQ9NXX6 385 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 HIST1H2AGP0C0S8 130 aaPredicted RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 HIST1H2ADP20671 130 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 MAP3K7CLP57077 242 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 C16orf72Q14CZ0 275 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ZC3H18Q86VM9 953 aaKnown RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 HIST1H2AHQ96KK5 128 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 HIST1H2AJQ99878 128 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 H2AFJQ9BTM1 129 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 MRPL4Q9BYD3 311 aaKnown RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 PTCH1Q13635 1447 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 GPC5P78333 572 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 KRT87PA6NCN2 255 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 LRRC23Q53EV4 343 aaPredicted RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 KRT35Q92764 455 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ABTB1Q969K4 478 aaPredicted RBP10.28□□□□□ -0.76
CUX1-203ENST00000360264 SMARCAL1Q9NZC9 954 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 FAM20AQ96MK3 541 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 TMEM63CQ9P1W3 806 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 VAMP7P51809 220 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 MTHFD1LQ6UB35 978 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 LCA5Q86VQ0 697 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 ZNF560Q96MR9 790 aa10.28□□□□□ -0.76
CUX1-203ENST00000360264 CFAP99D6REC4 459 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 PEX19P40855 299 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 SCN4BQ8IWT1 228 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 PGBD4Q96DM1 585 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 TIPINQ9BVW5 301 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 TADA3O75528 432 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 RASGRF1Q13972 1273 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 EFTUD2Q15029 972 aaKnown RBP eCLIP10.27□□□□□ -0.768e-8■■■■□ 20.9
CUX1-203ENST00000360264 AASDHQ4L235 1098 aaPredicted RBP10.27□□□□□ -0.76
CUX1-203ENST00000360264 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.76
CUX1-203ENST00000360264 FAM173BQ6P4H8 233 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 TTC17Q96AE7 1141 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 PAGE5Q96GU1 130 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 MTA3Q9BTC8 594 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 MOSPD1Q9UJG1 213 aa10.27□□□□□ -0.76
CUX1-203ENST00000360264 PPARDQ03181 441 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 KCND2Q9NZV8 630 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 PIM2Q9P1W9 311 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 STAP2Q9UGK3 403 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 ENC1O14682 589 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 ABCE1P61221 599 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 NOP53Q9NZM5 478 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 GRID2IPA4D2P6 1211 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 FAM187AA6NFU0 413 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 H0Y626 953 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 TRIM16O95361 564 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 CYP2C19P33261 490 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 ANXA11P50995 505 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 TTC30AQ86WT1 665 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 CDK8P49336 464 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 GFM2Q969S9 779 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 NDST4Q9H3R1 872 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 RNF103-CHMP3A0A140T963 221 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 CLRN2A0PK11 232 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 SAYSD1Q9NPB0 183 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 LSM7Q9UK45 103 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 AP2B1P63010 937 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 MED15Q96RN5 788 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 SARS2Q9NP81 518 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 DBNLQ9UJU6 430 aaKnown RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 HOXA13P31271 388 aaPredicted RBP10.27□□□□□ -0.77
CUX1-203ENST00000360264 KCNA1Q09470 495 aa10.27□□□□□ -0.77
CUX1-203ENST00000360264 KCTD16Q68DU8 428 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms