RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 JAK3P52333 1124 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 NEDD9Q14511 834 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 NFIL3Q16649 462 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 UGCGQ16739 394 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 ZNF569Q5MCW4 686 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 FRMD5Q7Z6J6 570 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 MYCT1Q8N699 235 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 ACRBPQ8NEB7 543 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 RDM1Q8NG50 284 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 AGPAT5Q9NUQ2 364 aa15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 EPN1Q9Y6I3 576 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-201ENST00000359867 IGHA2P01877 340 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF865P0CJ78 1059 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 SMPD1P17405 629 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 HOXD13P35453 343 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 QARSP47897 775 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 KLK7P49862 253 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CHMP4BP1P59074 171 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 LONRF2Q1L5Z9 754 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CELF3Q5SZQ8 465 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF746Q6NUN9 644 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CASP8AP2Q9UKL3 1982 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 PRPF6O94906 941 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 NR2F2P24468 414 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 KCNV1Q6PIU1 500 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 METTL7BQ6UX53 244 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CCDC60Q8IWA6 550 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CCDC170Q8IYT3 715 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 RABGGTAQ92696 567 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 CHP1Q99653 195 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 UBXN6Q9BZV1 441 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 SUGCTQ9HAC7 445 aa15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.14■□□□□ 0.01
CSNK1E-201ENST00000359867 RBM47A0AV96 593 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 NDUFA10O95299 355 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 C4orf19Q8IY42 314 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 TRIM17Q9Y577 477 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 TMEM150BA6NC51 233 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SLC16A3O15427 465 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 RHOXF2BP0C7M4 288 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 ARHGAP1Q07960 439 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SWSAP1Q6NVH7 229 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF720Q7Z2F6 126 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SPATA33Q96N06 139 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 PNKPQ96T60 521 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 RHOXF2Q9BQY4 288 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SH2D3AQ9BRG2 576 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 TIPINQ9BVW5 301 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 MMRN2Q9H8L6 949 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 METTL14Q9HCE5 456 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 GABBR1Q9UBS5 961 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 PLAGL2Q9UPG8 496 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 GSTTP1A0A1W2PQM5 241 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 ADCY3O60266 1144 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 HOXD10P28358 340 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 CYLC1P35663 651 aaPredicted RBP15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 ABHD15Q6UXT9 468 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SLC35F6Q8N357 371 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 ANKZF1Q9H8Y5 726 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 PCDHB13Q9Y5F0 798 aa15.13■□□□□ 0.01
CSNK1E-201ENST00000359867 SFI1A8K8P3 1242 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 BACH1O14867 736 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 TCF7P36402 384 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 PSMC5P62195 406 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 KRT83P78385 493 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 TNFAIP2Q03169 654 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF662Q6ZS27 426 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 TRIM50Q86XT4 487 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 FAM178BQ8IXR5 827 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 NUCKS1Q9H1E3 243 aaKnown RBP15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 KIF5CO60282 957 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 NR3C1P04150 777 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 KCNMA1Q12791 1236 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 ALCAMQ13740 583 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 DUSP28Q4G0W2 176 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 MFSD14CQ5VZR4 134 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 GPR20Q99678 358 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 ANKEF1Q9NU02 776 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 ARMCX3Q9UH62 379 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF862O60290 1169 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 GH1P01241 217 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 PSAPP07602 524 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 CYBAP13498 195 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 CNGA1P29973 690 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 LMAN1P49257 510 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 RARRES1P49788 294 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms