RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 EDRF1Q3B7T1 1238 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 ARSIQ5FYB1 569 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 CST9Q5W186 159 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 CACNA2D4Q7Z3S7 1137 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 C4orf19Q8IY42 314 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 FAM186BQ8IYM0 893 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 MSL3Q8N5Y2 521 aaKnown RBP5.56□□□□□ -1.52
ATXN3-202ENST00000359366 NEK11Q8NG66 645 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 CEP63Q96MT8 703 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 SYNGAP1Q96PV0 1343 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 POP1Q99575 1024 aaKnown RBP5.56□□□□□ -1.52
ATXN3-202ENST00000359366 GBP3Q9H0R5 595 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 NHEJ1Q9H9Q4 299 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-202ENST00000359366 ARHGAP20Q9P2F6 1191 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 GUCA1BQ9UMX6 200 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 PAXBP1Q9Y5B6 917 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 A0A0G2JMZ2 1700 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 EVPLQ92817 2033 aa5.56□□□□□ -1.52
ATXN3-202ENST00000359366 GSTTP1A0A1W2PQM5 241 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 DENND3A2RUS2 1198 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZSCAN12O43309 604 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TLR2O60603 784 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EXOC3O60645 756 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 URI1O94763 535 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 FARP2O94887 1054 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 NDUFA10O95299 355 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EPB41P11171 864 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 XRCC5P13010 732 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 SFNP31947 248 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TCF7P36402 384 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ETF1P62495 437 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZBED6P86452 979 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 RAPGEF1Q13905 1077 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 BMT2Q1RMZ1 405 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TSR1Q2NL82 804 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CBWD6Q4V339 395 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CBWD3Q5JTY5 395 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF569Q5MCW4 686 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CBWD5Q5RIA9 395 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 FASTKD5Q7L8L6 764 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EFCAB3Q8N7B9 438 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF513Q8N8E2 541 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 KIF18AQ8NI77 898 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 NEK9Q8TD19 979 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 PLEKHO2Q8TD55 490 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 BAP1Q92560 729 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 SLC35C1Q96A29 364 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 LACRTQ9GZZ8 138 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 POLR3FQ9H1D9 316 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 MLXIPQ9HAP2 919 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF302Q9NR11 478 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CYP26B1Q9NR63 512 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 DBR1Q9UK59 544 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZNF215Q9UL58 517 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ODF2LQ9ULJ1 636 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 FHOD1Q9Y613 1164 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EPN1Q9Y6I3 576 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ARID2Q68CP9 1835 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 MACROD2A1Z1Q3 448 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 AFPP02771 609 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ADORA2AP29274 412 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ADSSP30520 456 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ARHGAP25P42331 645 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 GFPT1Q06210 699 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TRIM14Q14142 442 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 C11orf91Q3C1V1 193 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 SEZ6Q53EL9 994 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TDRD12Q587J7 1177 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 LMBRD2Q68DH5 695 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 MIS18BP1Q6P0N0 1132 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 XRRA1Q6P2D8 792 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 HS2ST1Q7LGA3 356 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CBWD2Q8IUF1 395 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TMTC1Q8IUR5 882 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ZC3H3Q8IXZ2 948 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 LRRC71Q8N4P6 559 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TMEM161BQ8NDZ6 487 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 DNERQ8NFT8 737 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ASAP3Q8TDY4 903 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 GLG1Q92896 1179 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 ATP6V0A1Q93050 837 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CCDC127Q96BQ5 260 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 LENG1Q96BZ8 264 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 DRC1Q96MC2 740 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 IWS1Q96ST2 819 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 NUCKS1Q9H1E3 243 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 EPC1Q9H2F5 836 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 SUGCTQ9HAC7 445 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 KMT5AQ9NQR1 393 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 TOPORSQ9NS56 1045 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 GCNT4Q9P109 453 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
ATXN3-202ENST00000359366 FBXO40Q9UH90 709 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 CPA4Q9UI42 421 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 PNMA2Q9UL42 364 aa5.55□□□□□ -1.52
ATXN3-202ENST00000359366 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-202ENST00000359366 LRRIQ4A6NIV6 560 aa5.54□□□□□ -1.52
ATXN3-202ENST00000359366 ENC1O14682 589 aa5.54□□□□□ -1.52
ATXN3-202ENST00000359366 EIF3DO15371 548 aaKnown RBP eCLIP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms