RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PNMA3Q9UL41 463 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 CCDC188H7C350 402 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
SHANK1-202ENST00000359082 CRKP46108 304 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 TMEM35BQ8NCS4 154 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 DACH2Q96NX9 599 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 SLC13A1Q9BZW2 595 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 ZRANB2O95218 330 aaKnown RBP eCLIP19.56■□□□□ 0.72
SHANK1-202ENST00000359082 MAPK6Q16659 721 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 RMDN3Q96TC7 470 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 CASS4Q9NQ75 786 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 CYP26B1Q9NR63 512 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 SMARCA1P28370 1054 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 RFX8Q6ZV50 586 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 ECT2Q9H8V3 914 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF212Q9UDV6 495 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 GNAT1P11488 350 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 MCAMP43121 646 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 MORF4L2Q15014 288 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 TTC13Q8NBP0 860 aa19.56■□□□□ 0.72
SHANK1-202ENST00000359082 BSDC1Q9NW68 430 aaPredicted RBP19.56■□□□□ 0.72
SHANK1-202ENST00000359082 KDM5CP41229 1560 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 NMT2O60551 498 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 MOCS2O96007 188 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 ROR1Q01973 937 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 INTS2Q9H0H0 1204 aaKnown RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 EIF4E1BA6NMX2 242 aaKnown RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 DFFAO00273 331 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 ZBTB5O15062 677 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 GNA15P30679 374 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 CUL4AQ13619 759 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 TAGAPQ8N103 731 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 MARCH10Q8NA82 808 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 ZC3H15Q8WU90 426 aaKnown RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 TEKT4Q8WW24 435 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 GOLPH3LQ9H4A5 285 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 NDFIP2Q9NV92 336 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 UBA6A0AVT1 1052 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 OCM2P0CE71 109 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 OCMP0CE72 109 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 SLC10A5Q5PT55 438 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 CYB5R4Q7L1T6 521 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 TTLL11Q8NHH1 800 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 FEM1BQ9UK73 627 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 ATP7BP35670 1465 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 MAGI2Q86UL8 1455 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 PRCPP42785 496 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 GPS1Q13098 491 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 DDIASQ8IXT1 998 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 C21orf2O43822 256 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 AARSP49588 968 aaKnown RBP eCLIP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 TBC1D10CQ8IV04 446 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 GCOM2Q9BZD3 368 aaPredicted RBP19.55■□□□□ 0.72
SHANK1-202ENST00000359082 YY1AP1Q9H869 796 aa19.55■□□□□ 0.72
SHANK1-202ENST00000359082 STAT3P40763 770 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 NFRKBQ6P4R8 1299 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 SH3KBP1Q96B97 665 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 TGS1Q96RS0 853 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 VAMP7P51809 220 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 PDIA2Q13087 525 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 SNRNP48Q6IEG0 339 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ZNF746Q6NUN9 644 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 GIMAP8Q8ND71 665 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 AGR3Q8TD06 166 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 PPP1R36Q96LQ0 422 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 AATKQ6ZMQ8 1374 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 PNMA6AP0CW24 399 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L6PQ6QN14 398 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 CATSPER3Q86XQ3 398 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 XXYLT1Q8NBI6 393 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 BTBD6Q96KE9 485 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ZMAT2Q96NC0 199 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 CHCHD3Q9NX63 227 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 USP17L10C9JJH3 530 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 HAUS5O94927 633 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 TFDP2Q14188 446 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 HEATR6Q6AI08 1181 aaKnown RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 TOPORSQ9NS56 1045 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 RXRBP28702 533 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 LIFRP42702 1097 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 KCNH2Q12809 1159 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 PBXIP1Q96AQ6 731 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ARL8AQ96BM9 186 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ATXN7L3BQ96GX2 97 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 POLR3FQ9H1D9 316 aaPredicted RBP19.54■□□□□ 0.72
SHANK1-202ENST00000359082 IP6K2Q9UHH9 426 aa19.54■□□□□ 0.72
SHANK1-202ENST00000359082 ZSCAN9O15535 394 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms