RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 JAK3P52333 1124 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 HGSNATQ68CP4 663 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 DENND2CQ68D51 928 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 TPCN2Q8NHX9 752 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 AGPAT1Q99943 283 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
SSU72-202ENST00000359060 TAF1DQ9H5J8 278 aaPredicted RBP12.08□□□□□ -0.48
SSU72-202ENST00000359060 ASTN1O14525 1302 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 TTI1O43156 1089 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 PSMD10O75832 226 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 NEFHP12036 1026 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 PIK3CAP42336 1068 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 DR1Q01658 176 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 RRP1BQ14684 758 aaKnown RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 C1orf186Q6ZWK4 172 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ELMO3Q96BJ8 720 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 CELF4Q9BZC1 486 aaKnown RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 GANQ9H2C0 597 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 WNT10BO00744 389 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 PJA2O43164 708 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ATMINO43313 823 aaPredicted RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 CD19P15391 556 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 NR1D1P20393 614 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 GPC5P78333 572 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ARHGAP27Q6ZUM4 889 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 RHOT2Q8IXI1 618 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 RNPC3Q96LT9 517 aaKnown RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 HSD17B14Q9BPX1 270 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 AZI2Q9H6S1 392 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 VAV3Q9UKW4 847 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 PCDHA10Q9Y5I2 948 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 MYO1FO00160 1098 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 PSAPP07602 524 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 NR3C2P08235 984 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 PLS3P13797 630 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 MAPK4P31152 587 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 FKBP1AP62942 108 aaKnown RBP12.07□□□□□ -0.48
SSU72-202ENST00000359060 TRPC3Q13507 836 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 GADL1Q6ZQY3 521 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 LPAR1Q92633 364 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 FMO2Q99518 471 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
SSU72-202ENST00000359060 CYP3A4P08684 503 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 SOX10P56693 466 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 MEI1Q5TIA1 1274 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 OR2W6PQ8NHA6 318 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 NSUN6Q8TEA1 469 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 PAIP2Q9BPZ3 127 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 TRIM51Q9BSJ1 452 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 THAP2Q9H0W7 228 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 DEFB129Q9H1M3 183 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 FAM114A2Q9NRY5 505 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 DDX3XO00571 662 aaKnown RBP eCLIP12.06□□□□□ -0.481e-20■■■■□ 19.5
SSU72-202ENST00000359060 KRT19P08727 400 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 SEPT7Q16181 437 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 DCUN1D2Q6PH85 259 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 KCND2Q9NZV8 630 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 NOVA2Q9UNW9 492 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 ANKRD62A6NC57 917 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 F8VZ95 297 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CUL1Q13616 776 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 PPP2R5EQ16537 467 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 SNRNP35Q16560 246 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 KRT39Q6A163 491 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 CBWD2Q8IUF1 395 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 MRRFQ96E11 262 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
SSU72-202ENST00000359060 P2RX7Q99572 595 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms