RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 CREG2Q8IUH2 290 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC13Q8IYE1 715 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SYN2Q92777 582 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 AGPAT1Q99943 283 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 NUP85Q9BW27 656 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 AS3MTQ9HBK9 375 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 TPX2Q9ULW0 747 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ZBTB39O15060 712 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 KCNA1Q09470 495 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF564Q8TBZ8 553 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 RUNDC3BQ96NL0 473 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 MIF4GDA9UHW6 222 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 MYBL2P10244 700 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 OSTNP61366 133 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ATP11AP98196 1134 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SPATS2Q86XZ4 545 aaKnown RBP13.17□□□□□ -0.3
COL20A1-201ENST00000358894 SLC30A5Q8TAD4 765 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 GRK7Q8WTQ7 553 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 GABBR1Q9UBS5 961 aa13.17□□□□□ -0.3
COL20A1-201ENST00000358894 ZNF233A6NK53 670 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 SETSIPP0DME0 302 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 SEC24CP53992 1094 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 NPEPPSP55786 919 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 AMPD2Q01433 879 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 ALCAMQ13740 583 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC89Q8N998 374 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CASKIN2Q8WXE0 1202 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 ENTPD3O75355 529 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 TMEM191BP0C7N4 346 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 ARP10275 920 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 SREBF1P36956 1147 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 BPIFB4P59827 614 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 COG2Q14746 738 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 ECM1Q16610 540 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 HHATQ5VTY9 493 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 C11orf70Q9BRQ4 267 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 SLITRK6Q9H5Y7 841 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 OSGEPQ9NPF4 335 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 GAKO14976 1311 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 COL23A1Q86Y22 540 aaPredicted RBP13.16□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC197Q8NCU1 140 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 DNAJC19Q96DA6 116 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 TBC1D22BQ9NU19 505 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 HSPBP1Q9NZL4 362 aa13.16□□□□□ -0.3
COL20A1-201ENST00000358894 K7ERI5 159 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 PPP1R37O75864 691 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 ATP2A2P16615 1042 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 DYNLT1P63172 113 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC137Q6PK04 289 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 LMNTD2Q8IXW0 634 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 TPCN2Q8NHX9 752 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 PSMD1Q99460 953 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 ANAPC5Q9UJX4 755 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 H0YCG3 227 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 PRLRP16471 622 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 KRT39Q6A163 491 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 C1orf54Q8WWF1 131 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 KIFC3Q9BVG8 833 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 CCND2P30279 289 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 GBP1P32455 592 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 EIF3BP55884 814 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 CORO7P57737 925 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 SESN3P58005 492 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 CCDC38Q502W7 563 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
COL20A1-201ENST00000358894 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
COL20A1-201ENST00000358894 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms