RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PNMA2Q9UL42 364 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 UBE4BO95155 1302 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ALDH18A1P54886 795 aaKnown RBP9.32□□□□□ -0.92
COL6A6-201ENST00000358511 XKR9Q5GH70 373 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 ZBTB8OSQ8IWT0 167 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 TMEM120BA0PK00 339 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 STK25O00506 426 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 UFL1O94874 794 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 RCAN1P53805 252 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 NCAPHQ15003 741 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 DDI1Q8WTU0 396 aa9.32□□□□□ -0.92
COL6A6-201ENST00000358511 PLA2G4BP0C869 781 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 SEC24CP53992 1094 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 C16orf89Q6UX73 402 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 RIBC1Q8N443 379 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 SUGCTQ9HAC7 445 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CNGB3Q9NQW8 809 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 PLD3Q8IV08 490 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 MTBPQ96DY7 904 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ADNPQ9H2P0 1102 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ZFYVE1Q9HBF4 777 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CHMP2BQ9UQN3 213 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 C16orf96A6NNT2 1141 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 GOLGA8SH3BPF8 625 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 GOLGA8MH3BSY2 632 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CDC25AP30304 524 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ITKQ08881 620 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 THOC5Q13769 683 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 INPP5AQ14642 412 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 RANBP17Q9H2T7 1088 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 KRR1Q13601 381 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 TRIP10Q15642 601 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 METTL16Q86W50 562 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 NAF1Q96HR8 494 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 KCNK16Q96T55 309 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 OSBPL8Q9BZF1 889 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 OLFML3Q9NRN5 406 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 COPG1Q9Y678 874 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CLIC2O15247 247 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 PAMP19021 973 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 PSMA2P25787 234 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 KIAA1755Q5JYT7 1200 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 TBC1D9BQ66K14 1250 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 MMGT1Q8N4V1 131 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF564Q8TBZ8 553 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 RASGRP4Q8TDF6 673 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ATP6V1E2Q96A05 226 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CLMNQ96JQ2 1002 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 UNC13BO14795 1591 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 POLGP54098 1239 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CATSPER3Q86XQ3 398 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 O00370 1275 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CALB1P05937 261 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 POLR2MP0CAP2 368 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 NLRP11P59045 1033 aaKnown RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ADRM1Q16186 407 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 TC2NQ8N9U0 490 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 THTPAQ9BU02 230 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 GCOM2Q9BZD3 368 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 PHF2O75151 1096 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ADD2P35612 726 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ARL4AP40617 200 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 KRT17Q04695 432 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ZBTB38Q8NAP3 1195 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF555Q8NEP9 628 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
COL6A6-201ENST00000358511 PSMC3IPQ9P2W1 217 aaPredicted RBP9.31□□□□□ -0.92
COL6A6-201ENST00000358511 CHD4Q14839 1912 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 GTPBP10A4D1E9 387 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF839A8K0R7 811 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 POLD1P28340 1107 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 IGBP1P78318 339 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 VPS39Q96JC1 886 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 HNRNPCL2B2RXH8 293 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 NPR1P16066 1061 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 TARSP26639 723 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CARSP49589 748 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 HORMAD1Q86X24 394 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ROPN1BQ9BZX4 212 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ROPN1Q9HAT0 212 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 HSPA1AP0DMV8 641 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 HSPA1BP0DMV9 641 aaKnown RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 YWHAHQ04917 246 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ORC2Q13416 577 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 SKA2Q8WVK7 121 aaPredicted RBP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 CCPG1Q9ULG6 757 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ATP6V1G2O95670 118 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ADORA1P30542 326 aa9.3□□□□□ -0.92
COL6A6-201ENST00000358511 AARSP49588 968 aaKnown RBP eCLIP9.3□□□□□ -0.92
COL6A6-201ENST00000358511 ZBTB18Q99592 522 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms