RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 H0YCG3 227 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 TIMP1P01033 207 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 EFNA5P52803 228 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 NCKAP1LP55160 1127 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 POU5F1BQ06416 359 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
TPM1-206ENST00000358278 SRGAP1Q7Z6B7 1085 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 SCLYQ96I15 445 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 NFKBIZQ9BYH8 718 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 WNT8AQ9H1J5 351 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 ARHGAP28Q9P2N2 729 aa16.8■□□□□ 0.28
TPM1-206ENST00000358278 CSDE1O75534 798 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 RHOBTB3O94955 611 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 GCNT3O95395 438 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 PARNO95453 639 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 IQCF3P0C7M6 154 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 GHRP10912 638 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 DARSP14868 501 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
TPM1-206ENST00000358278 NMT1P30419 496 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 KCNB1Q14721 858 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 HAUS6Q7Z4H7 955 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 TMEM161BQ8NDZ6 487 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 TMEM40Q8WWA1 233 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 NTPCRQ9BSD7 190 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 PHLPP2Q6ZVD8 1323 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 DENND3A2RUS2 1198 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 RPS6KA5O75582 802 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 ERLIN2O94905 339 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 ABCD1P33897 745 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 EHHADHQ08426 723 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 PSMD2Q13200 908 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 MAPK6Q16659 721 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 FBXO47Q5MNV8 452 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
TPM1-206ENST00000358278 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 FIZ1Q96SL8 496 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 MINDY3Q9H8M7 445 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 SLC39A2Q9NP94 309 aa16.79■□□□□ 0.28
TPM1-206ENST00000358278 K7ERI5 159 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 SYN1P17600 705 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 SCP2P22307 547 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 ITGB8P26012 769 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 MBTD1Q05BQ5 628 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 STRN3Q13033 797 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 PAK2Q13177 524 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 ALCAMQ13740 583 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 LPIN1Q14693 890 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 NT5DC1Q5TFE4 455 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 CATSPER4Q7RTX7 472 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 TMEM199Q8N511 208 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 USP38Q8NB14 1042 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 ZMYND8Q9ULU4 1186 aaPredicted RBP16.78■□□□□ 0.28
TPM1-206ENST00000358278 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
TPM1-206ENST00000358278 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 SQORQ9Y6N5 450 aa16.78■□□□□ 0.28
TPM1-206ENST00000358278 BIN1O00499 593 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 PRKCBP05771 671 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 MYBP10242 640 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 FGFR4P22455 802 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 CASP5P51878 434 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
TPM1-206ENST00000358278 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 FAM228AQ86W67 206 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 FGFBP2Q9BYJ0 223 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 TMEM134Q9H6X4 195 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
TPM1-206ENST00000358278 MAN1B1Q9UKM7 699 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.28
TPM1-206ENST00000358278 NBNO60934 754 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 CD52P31358 61 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 RFC2P35250 354 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 SARSP49591 514 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 STK4Q13043 487 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.274e-6■□□□□ 10.4
TPM1-206ENST00000358278 TMEM132AQ24JP5 1023 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 ZC2HC1CQ53FD0 456 aaPredicted RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 ISM2Q6H9L7 571 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 DEFB128Q7Z7B8 93 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 IFIH1Q9BYX4 1025 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 CCDC113Q9H0I3 377 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 ST6GALNAC4Q9H4F1 302 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 PCDH10Q9P2E7 1040 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 CITO14578 2027 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 GPR182O15218 404 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 EIF3DO15371 548 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM1-206ENST00000358278 GTF2BQ00403 316 aa16.76■□□□□ 0.27
TPM1-206ENST00000358278 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 ZNF658Q5TYW1 1059 aaPredicted RBP16.76■□□□□ 0.27
TPM1-206ENST00000358278 KIAA0895Q8NCT3 520 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms