RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CCNB1P14635 433 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 CHRNA3P32297 505 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 TXKP42681 527 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 MECOMQ03112 1051 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 PPATQ06203 517 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 CXCL9Q07325 125 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 MAPK7Q13164 816 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 DACT2Q5SW24 774 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 ZDHHC24Q6UX98 284 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 GPC2Q8N158 579 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 GRAMD1AQ96CP6 724 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 RAB3IPQ96QF0 476 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 ELAC2Q9BQ52 826 aaKnown RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 TRIM7Q9C029 511 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 RXFP1Q9HBX9 757 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 AGAP1Q9UPQ3 857 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 WDR90Q96KV7 1748 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 KLRF2D3W0D1 207 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 UBOX5O94941 541 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 FESP07332 822 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 ATP11AP98196 1134 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 PARP6Q2NL67 630 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 SPTY2D1Q68D10 685 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 RNF43Q68DV7 783 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
CAPN3-205ENST00000357568 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
CAPN3-205ENST00000357568 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 MIF4GDA9UHW6 222 aaKnown RBP11.49□□□□□ -0.57
CAPN3-205ENST00000357568 BACH1O14867 736 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 PHF2O75151 1096 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 VIMP08670 466 aaKnown RBP11.49□□□□□ -0.57
CAPN3-205ENST00000357568 ALAS1P13196 640 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 RARGP13631 454 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 ATP2A2P16615 1042 aaKnown RBP11.49□□□□□ -0.57
CAPN3-205ENST00000357568 RWDD2BP57060 319 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 GTF2IP78347 998 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 EXOC3L4Q17RC7 722 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 TRMT10CQ7L0Y3 403 aaKnown RBP11.49□□□□□ -0.57
CAPN3-205ENST00000357568 DAAM2Q86T65 1068 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 DPH5Q9H2P9 285 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 AZI2Q9H6S1 392 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 ABCF3Q9NUQ8 709 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 PRKAG3Q9UGI9 489 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 RPTORQ8N122 1335 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 FGGP02679 453 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 CYP2D6P10635 497 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 PON1P27169 355 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 MSH2P43246 934 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 NOVP48745 357 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 PLS1Q14651 629 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 DIXDC1Q155Q3 683 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 SPDYAQ5MJ70 313 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 AP1ARQ63HQ0 302 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 CYFIP1Q7L576 1253 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 KLHL29Q96CT2 875 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 PRMT1Q99873 361 aaKnown RBP11.49□□□□□ -0.57
CAPN3-205ENST00000357568 TMEM47Q9BQJ4 181 aa11.49□□□□□ -0.57
CAPN3-205ENST00000357568 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 BAZ2BQ9UIF8 2168 aaKnown RBP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 IGF2BP3O00425 579 aaKnown RBP eCLIP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 SHBGP04278 402 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 PTGIRP43119 386 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 ADAM9Q13443 819 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 RBBP5Q15291 538 aaKnown RBP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 LRRC41Q15345 812 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 EPHA7Q15375 998 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 ZNF568Q3ZCX4 644 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 MORC4Q8TE76 937 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 SERPINB12Q96P63 405 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 TRIM51Q9BSJ1 452 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 RIOX1Q9H6W3 641 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 USP40Q9NVE5 1235 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 GRHL1Q9NZI5 618 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 ARMCX3Q9UH62 379 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 LRRC42Q9Y546 428 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 SCN4AP35499 1836 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 NAV1Q8NEY1 1877 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 SPDYE3A6NKU9 549 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 DDX3XO00571 662 aaKnown RBP eCLIP11.48□□□□□ -0.57
CAPN3-205ENST00000357568 DIAPH2O60879 1101 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 RAD17O75943 681 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 KCNJ2P63252 427 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 ARID5AQ03989 594 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 BIRC2Q13490 618 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
CAPN3-205ENST00000357568 FAM133BQ5BKY9 247 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms